Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq6 190 3e-43 seq1 136 6e-27 seq9 89.7 8e-13 >seq6 Length=784318 Score = 190 bits (210), Expect = 3e-43 Identities = 553/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 ||| |||| ||| || ||| |||| ||||| ||||| ||||| || | | || || Sbjct 310614 AGCCTTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAAT 310673 Query 17920 TAAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTA 17979 | ||| |||||||| ||||| | |||||| | || || | || | Sbjct 310674 GTTTTCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCAC 310733 Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039 || |||||||| || |||||||| |||||||| |||||||||| ||||| || || Sbjct 310734 CAACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAG 310793 Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTAT 18099 | | | || || ||||| ||| | | | ||| || ||||| | |||| | || Sbjct 310794 CAATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAAT 310853 Query 18100 TATGTTTATTACCCTAGATTTTGGCAATT----TATTAATTATGTGATTATAATATAATA 18155 || || || |||||| | | || |||| | | ||| | || | | | Sbjct 310854 GATTCTTTCAAC----GATTTTTGGATTTGGCTTATTTTTCAAGTG--TGCAA-ACAGCA 310906 Query 18156 AACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTA 18215 ||||||||||||| || |||||||||||||||||| | || | || || ||| || | Sbjct 310907 AACACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCA 310966 Query 18216 ACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGA 18275 | || ||||| | |||| | ||||| ||||| || || | ||| ||| || || || | Sbjct 310967 AACCCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAA 311026 Query 18276 ATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC- 18334 | | ||| ||||| || || || | ||||||||| | ||| || || || || Sbjct 311027 AAACACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAA-AGTGCTTCTTCGTCT 311085 Query 18335 AGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCA 18394 | ||||| || ||||||| | | || ||| ||| | || || ||| Sbjct 311086 TGAATCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCA 311145 Query 18395 TTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454 || |||||| || ||||||||| || || || || || || || | | || || Sbjct 311146 TTGAACAAAAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAA 311205 Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGA 18514 | || || || ||| ||||||| || ||||| | ||||| || | || || ||| Sbjct 311206 GTCTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGA 311265 Query 18515 TATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574 ||| | || | | || |||| |||| ||| || || ||||| || || | | | Sbjct 311266 CTTTGCACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCT 311325 Query 18575 GCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATC---CTTGAGATTGTTC 18631 || ||||| || | || | ||||| |||||| || | || |||||||| Sbjct 311326 GCAAAAAACGCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGTTCATGCGATTGTTC 311385 Query 18632 CATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCC 18691 || || | |||||| || |||||||| | ||| |||| |||||||| || | ||||| Sbjct 311386 CAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCG 311445 Query 18692 TGTTTGTA 18699 |||| || Sbjct 311446 CGTTTATA 311453 >seq1 Length=1828985 Score = 136 bits (150), Expect = 6e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | || || ||||||||||| || ||||| | ||||| ||| | Sbjct 1304351 AAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCT 1304410 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| |||||||| | || || ||||| || ||||| || || ||||| Sbjct 1304411 TCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGAC 1304470 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 || ||||||||||||| ||| || || || | |||||| ||||||||| || || || Sbjct 1304471 CAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTAC 1304530 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGA 156038 | ||||||||| || |||| || || || ||| | ||| Sbjct 1304531 A--ATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGA 1304569 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| ||||| ||||| || || || |||| || ||| |||| Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| |||||||| | || || ||||| || || || || || ||||| || Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| || || || | |||||| ||||||||| || || || ||| Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || || |||| || || || ||| | ||| || | |||||| Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTACGGGGCGGT 1305037 Score = 125 bits (138), Expect = 1e-23 Identities = 161/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| |||||||| | || || || ||||| || || || || ||||| || Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| || || || | |||||| ||||||||| || || || | Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACA-- 1304759 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040 | ||||||| || |||| || || || ||| | ||||| Sbjct 1304760 ACATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATT 1304799 >seq9 Length=718525 Score = 89.7 bits (98), Expect = 8e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | || || |||||||| || || || || || ||||| ||| ||| || | ||| Sbjct 427480 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCATT 427421 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 || || || || || ||||| || || || || ||||| || || || |||||| Sbjct 427420 GACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATTG 427361 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | || ||||||||||| ||||| |||||| || || || || || || || Sbjct 427360 ATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAAG 427301 Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | || || || || ||||| ||||| ||| Sbjct 427300 GAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 427262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871780438400