Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 9e-26
seq6 109 1e-18
seq9 98.7 2e-15
seq3 93.3 8e-14
>seq1
Length=1828985
Score = 132 bits (146), Expect = 9e-26
Identities = 141/186 (76%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||| || ||||| || |||| |||| ||||||||||| || ||||| || |||||
Sbjct 1304536 GATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCT 1304477
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| || || ||||| || ||||| || ||||| || || | || || || ||||
Sbjct 1304476 TTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGT 1304417
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || ||||| ||||| ||||||||||| || ||||| || || || | ||| |||||
Sbjct 1304416 GTCCGAAGATTCCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTG 1304357
Query 192534 CATTTT 192539
||||||
Sbjct 1304356 CATTTT 1304351
Score = 114 bits (126), Expect = 3e-20
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || ||||| || |||| |||| ||||||||||| || ||||| || |||||
Sbjct 1304764 GATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCT 1304705
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| || || ||||| || || || ||||| || || || | || || || ||||
Sbjct 1304704 TTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGT 1304645
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || || || ||||| ||||||||||| || || || || ||||| | ||| |||||
Sbjct 1304644 GTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTG 1304585
Query 192534 CAT 192536
|||
Sbjct 1304584 CAT 1304582
Score = 113 bits (124), Expect = 9e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| || ||||| || |||| |||| ||||||||||| || ||||| || |||||
Sbjct 1304991 ATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTT 1304932
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|| || || ||||| || || || || ||||| || || | || || || ||||
Sbjct 1304931 TGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTG 1304872
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| || ||||| || |||||||| ||||| || || || || ||||| | || ||||||
Sbjct 1304871 TCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGC 1304812
Query 192535 AT 192536
||
Sbjct 1304811 AT 1304810
>seq6
Length=784318
Score = 109 bits (120), Expect = 1e-18
Identities = 280/424 (66%), Gaps = 7/424 (2%)
Strand=Plus/Plus
Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706
|| |||||||| || |||||||| |||||||| ||| || || ||||| ||||
Sbjct 310735 AACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGC 310794
Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 49766
||| | || | ||||| || | | | || ||||| || || | | ||||
Sbjct 310795 AATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854
Query 49767 atcataattatattattttttgataat--ttatatttaatatgattcgcatatattaaAC 49824
|| | || | |||||| ||| |||| ||| | || ||| | | ||||
Sbjct 310855 ATTCT--TTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGT---GCAAACAGCAAAC 310909
Query 49825 ATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 49884
| |||||||| ||||||||||| || || || | || | ||||| ||| || || |
Sbjct 310910 ACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAAC 310969
Query 49885 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 49944
| ||||| || ||| ||||||| ||||| || || | ||||||| || || || || |
Sbjct 310970 CCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAA 311029
Query 49945 TACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATA 50004
||| || ||| ||||| || | | |||| | || || | | || || ||| |
Sbjct 311030 CACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAA 311089
Query 50005 TCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 50064
|||| |||| ||||| | || |||| |||||| || ||| |||| || || || |
Sbjct 311090 TCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGA 311149
Query 50065 ATAA 50068
| ||
Sbjct 311150 ACAA 311153
>seq9
Length=718525
Score = 98.7 bits (108), Expect = 2e-15
Identities = 156/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363
|| ||||||||||| | | || || || || ||||| | || || ||| || ||
Sbjct 427257 ATGATACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAG 427316
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
|| || || |||| | || || | || |||||||| ||||| |||||||| || |||
Sbjct 427317 TCGGACAAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCA 427376
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || || || || || ||||| || || || ||||| || | || || |||
Sbjct 427377 GGAGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGAT 427436
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 427437 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
>seq3
Length=955168
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || || || | || || ||| || || || ||
Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | || ||||| || |||||||||||||| ||||||||||| ||||| ||
Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || || || || || || ||||| || | || || || || ||
Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || || || ||||| |||| || || | || || ||||| ||
Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479697272400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |