Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 132 9e-26 seq6 109 1e-18 seq9 98.7 2e-15 seq3 93.3 8e-14 >seq1 Length=1828985 Score = 132 bits (146), Expect = 9e-26 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || ||||| || |||| |||| ||||||||||| || ||||| || ||||| Sbjct 1304536 GATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCT 1304477 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || || || ||||| || ||||| || ||||| || || | || || || |||| Sbjct 1304476 TTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGT 1304417 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||||| ||||| ||||||||||| || ||||| || || || | ||| ||||| Sbjct 1304416 GTCCGAAGATTCCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTG 1304357 Query 192534 CATTTT 192539 |||||| Sbjct 1304356 CATTTT 1304351 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| || |||| |||| ||||||||||| || ||||| || ||||| Sbjct 1304764 GATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCT 1304705 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || || || ||||| || || || ||||| || || || | || || || |||| Sbjct 1304704 TTGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGT 1304645 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || || ||||| ||||||||||| || || || || ||||| | ||| ||||| Sbjct 1304644 GTCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTG 1304585 Query 192534 CAT 192536 ||| Sbjct 1304584 CAT 1304582 Score = 113 bits (124), Expect = 9e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| || ||||| || |||| |||| ||||||||||| || ||||| || ||||| Sbjct 1304991 ATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTT 1304932 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || ||||| || || || || ||||| || || | || || || |||| Sbjct 1304931 TGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTG 1304872 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| || |||||||| ||||| || || || || ||||| | || |||||| Sbjct 1304871 TCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGC 1304812 Query 192535 AT 192536 || Sbjct 1304811 AT 1304810 >seq6 Length=784318 Score = 109 bits (120), Expect = 1e-18 Identities = 280/424 (66%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 || |||||||| || |||||||| |||||||| ||| || || ||||| |||| Sbjct 310735 AACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGC 310794 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 49766 ||| | || | ||||| || | | | || ||||| || || | | |||| Sbjct 310795 AATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATG 310854 Query 49767 atcataattatattattttttgataat--ttatatttaatatgattcgcatatattaaAC 49824 || | || | |||||| ||| |||| ||| | || ||| | | |||| Sbjct 310855 ATTCT--TTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGT---GCAAACAGCAAAC 310909 Query 49825 ATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 49884 | |||||||| ||||||||||| || || || | || | ||||| ||| || || | Sbjct 310910 ACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAAC 310969 Query 49885 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 49944 | ||||| || ||| ||||||| ||||| || || | ||||||| || || || || | Sbjct 310970 CCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAA 311029 Query 49945 TACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATA 50004 ||| || ||| ||||| || | | |||| | || || | | || || ||| | Sbjct 311030 CACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAA 311089 Query 50005 TCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 50064 |||| |||| ||||| | || |||| |||||| || ||| |||| || || || | Sbjct 311090 TCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGA 311149 Query 50065 ATAA 50068 | || Sbjct 311150 ACAA 311153 >seq9 Length=718525 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 || ||||||||||| | | || || || || ||||| | || || ||| || || Sbjct 427257 ATGATACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAG 427316 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 || || || |||| | || || | || |||||||| ||||| |||||||| || ||| Sbjct 427317 TCGGACAAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCA 427376 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || || || || || ||||| || || || ||||| || | || || ||| Sbjct 427377 GGAGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGAT 427436 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 || ||||| | ||| ||||| |||||||| || || || | ||| Sbjct 427437 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480 >seq3 Length=955168 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || || || Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || ||||| || |||||||||||||| ||||||||||| ||||| || Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || || || || || || ||||| || | || || || || || Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || || ||||| |||| || || | || || ||||| || Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479697272400