Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 6e-34
seq1 132 9e-26
seq3 107 3e-18
seq9 100 5e-16
>seq6
Length=784318
Score = 159 bits (176), Expect = 6e-34
Identities = 364/543 (67%), Gaps = 11/543 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || |||||| ||||||||||||| || || || || ||| || ||
Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677
Query 38892 TTCATAAAATCAAATGGATTTTTGGTA--TTATAATATTTTTCTCCTATCAATACATATA 38949
| ||| |||||||| ||||| | || |||||| | || || ||| | |
Sbjct 310678 TCCATGAAATCAAAAGGATTG--GATACCTTATAAAACTTGTCATTACCCAAAGCCACCA 310735
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
| |||||||| || |||||||| |||||||| ||| || || ||||| |||| |
Sbjct 310736 ACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCA 310795
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| | || | ||||| || | | | || ||||| || || | | |||| |
Sbjct 310796 ATGATACGGGCAGGGCATCTCTAAAATAACGCTGCTCAATTTCAACCGCCTCTGTAATGA 310855
Query 39070 tcataattatattattttttgataat--ttatatttaatatgattcgcatataGTAAACA 39127
| | || | |||||| ||| |||| ||| | || ||| | || |||||
Sbjct 310856 TTCT--TTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGT---GCAAACAGCAAACA 310910
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||||||||||||||||||||||| || || | || | ||||| ||| || || ||
Sbjct 310911 CGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACC 310970
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
||||| || ||| ||||||| ||||| || || | ||||||| || || || || |
Sbjct 310971 CGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAAC 311030
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
||| || ||| ||||| || | | |||| | || || | | || || ||| |||
Sbjct 311031 ACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAAT 311090
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| |||||||||| | || |||| |||||| || ||| |||| || || || ||
Sbjct 311091 CCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAA 311150
Query 39368 TAA 39370
||
Sbjct 311151 CAA 311153
>seq1
Length=1828985
Score = 132 bits (146), Expect = 9e-26
Identities = 169/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | |||| | || || || | ||| | || || ||||| || ||
Sbjct 1304583 ATACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCA 1304524
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || ||||||||||| || |||||||| ||||| || ||||| |||
Sbjct 1304523 GACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGT 1304464
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || | || || || ||||| || || |||||
Sbjct 1304463 GGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCC 1304404
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||||||||| || ||||| || || || | || |||||||||||
Sbjct 1304403 ACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
Score = 122 bits (134), Expect = 2e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| || || || |||| || | || ||||||||||| || |||||||| |||||
Sbjct 1304991 ATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTT 1304932
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| ||||| || || || || ||||| || || | || || || |||||
Sbjct 1304931 TGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTG 1304872
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || ||||| || |||||||| ||||| || || || || ||||| | ||| ||||||
Sbjct 1304871 TCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGC 1304812
Query 172068 AT 172069
||
Sbjct 1304811 AT 1304810
Score = 113 bits (124), Expect = 8e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || || || || |||| || | || ||||||||||| || |||||||| |||||
Sbjct 1304763 ATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTT 1304704
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| ||||| || || || ||||| || || || | || || || |||||
Sbjct 1304703 TGCTGGTCTGGTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTG 1304644
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || || ||||| ||||||||||| || || || || ||||| | || ||||||
Sbjct 1304643 TCAGAAGACTCCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGC 1304584
Query 172068 AT 172069
||
Sbjct 1304583 AT 1304582
>seq3
Length=955168
Score = 107 bits (118), Expect = 3e-18
Identities = 167/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || || || | || || || ||
Sbjct 273702 TTCTTACCACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTG 273761
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || |||| ||||| || ||||||||||| || ||||||||||||
Sbjct 273762 TAGTCCGACAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGG 273821
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
||||| || || ||||| || || || || || || ||||| || || || ||
Sbjct 273822 TCAGGAGGAATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAA 273881
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || || || || || || || ||||| |||| || || | ||| || ||||| ||
Sbjct 273882 GACTCCACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940
>seq9
Length=718525
Score = 100 bits (110), Expect = 5e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || ||||| | || || || || ||
Sbjct 427257 ATGATACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAG 427316
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| || | || |||||||| || || |||||||| ||||||
Sbjct 427317 TCGGACAAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCA 427376
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || || || || || ||||| || || || ||||| || || || || |||
Sbjct 427377 GGAGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGAT 427436
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || || ||
Sbjct 427437 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTT 427474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135728459200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |