Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 4e-20
seq6 104 7e-17
seq1 84.2 6e-11
>seq5
Length=910667
Score = 114 bits (126), Expect = 4e-20
Identities = 222/326 (68%), Gaps = 4/326 (1%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| | ||| |||||||| | | || | |||||||| ||||||||||||||
Sbjct 736579 ATCATAATGCACCATGATGTCTTCTAGAGCTTTAACCAAACGACGTTGAATATAACCAGT 736520
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | || || |||||||| ||||| ||||| |||| |||||||| || || |||||
Sbjct 736519 TTCTGCAGTCTTCACAGCTGTGTCAATCAGACCTTCACGTCCACCCATGGCGTGAAAGAA 736460
Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732
| |||| || ||||| | | | || | ||||| ||||| | || ||
Sbjct 736459 AAATTCTTGAGGAGTGAGCCCTCTTAGGTACGAATTTTCAACAAAACCTTTAGATTCAGG 736400
Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792
|||| |||| ||| | |||||| || || |||| | || | || | | |||||
Sbjct 736399 AGAATAGTCGTCCTTAGAAAAGTGAGGTAGCGTCCGATCGGCAAATCCAAACGCAATACG 736340
Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCA 302850
|| || || ||| ||| || || | ||| | | |||||| | ||||| ||||| |
Sbjct 736339 TTTACCCTCGACGGACTGTTGGCCAACGCAAGCAGACATCTGAGCGATATTAATAAATGA 736280
Query 302851 CTGCCCTTGGAGCCAGCATTTACCAT 302876
|| || ||||| ||| |||||||
Sbjct 736279 --ACCTTTTGAGCCTGCACTTACCAT 736256
Score = 84.2 bits (92), Expect = 6e-11
Identities = 128/182 (70%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 303637 TGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTCCGCAACGTTC 303696
|| |||||||| || |||||||| ||||| ||||| || || ||| ||| | ||||
Sbjct 735489 TGCAAATTCATTTCGTCACCGTCGAAATCGGCATTGTATGGTGAGGTGACCGATAAGTTC 735430
Query 303697 ATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCATAGACATTCTG 303756
| | |||||| | |||| ||| || | || ||||||||||||| ||
Sbjct 735429 AATCTAAAAGTAGAATAAGGCAT---AACCTTAACTCTGTGGGCCATCATAGACATTTTG 735373
Query 303757 TGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATGACGATGAACC 303816
||||| | || |||||||||||||| ||||| || ||| || | ||| || | ||||
Sbjct 735372 TGTAGGGAGGGTTGACGATTGAAAAGAACGGGATCGTCGTCTATAATATGCCGTTCAACC 735313
Query 303817 TT 303818
||
Sbjct 735312 TT 735311
>seq6
Length=784318
Score = 104 bits (114), Expect = 7e-17
Identities = 343/520 (66%), Gaps = 34/520 (7%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||| ||||||||||||||| |||||||| ||||| | | ||||||||| |
Sbjct 547680 GCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAATCTCAAACCACCATCTCTT 547621
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACC---ATAGGACCGATGGAGCGGCTA 251601
| ||||| || ||||||| | || || ||| | |||||| || | | |
Sbjct 547620 GATCTACCTTCCACAGGCTGTCTTGTTAGG---ACCTGTACAGGACCACGGGCTCTGGCA 547564
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
|| || |||| |||||||| | ||||||||||| | | ||||||| ||| ||
Sbjct 547563 TGGATTTTGTCATCGACCATATGTCTCAGACGCTGGTAATAGGTTGGACCGAAGAATAT- 547505
Query 251662 CTCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718
| || | |||| | | | || || || | || ||||| ||||| ||| ||
Sbjct 547504 -TTGA-GCCATTAGTTTTTTACCCGTGTGACCATTGTACATGACTTCAAAACCACGCGAC 547447
Query 251719 TCATAACCAAGTTTCTGTAGC--TCTGAAGCAATATCACCAATCTTGAATTTGCTAAAAC 251776
| |||||| ||| |||| |||| | |||| | ||| || ||| | ||
Sbjct 547446 TGGTAACCATGTTCACGTAGAAGTCTGGA--AATACCGTCAA-CTGTAATGTCAGTGAAT 547390
Query 251777 TG-GTGCCGTCTCCGTAAAGACCCATTTGAATCAAC------ACTTTGCCTAAAAGTGTC 251829
| | | | || || | | ||| ||| || | ||||||| | | |
Sbjct 547389 GGCGAGGCATCACCTTCATTACC----TGA--CAGCGCGGCTACTTTGCTCAGCAAACAC 547336
Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889
|| ||| || || | |||||||||| ||||| || || || |||||||| | |||
Sbjct 547335 TCAATCAAGTGAGCAACAGTCATACGAGAAGGAATGGCGTGTGGGTTGATGATCAAATCG 547276
Query 251890 GGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT-CAATAA-TGTTTCCAATAG 251947
|| || || || |||||||| |||||||||| ||| | ||| | | |||||||
Sbjct 547275 GGGACCACACCTTCTGCAGTGAAAGGCATATCCTC--CCTGCGATACGTAATACCAATAG 547218
Query 251948 TTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || ||||| |||||||||||| |||||| ||||| ||
Sbjct 547217 TACCTTTTTGACCGTGACGAGAAGCGAACTTGTCACCTAT 547178
>seq1
Length=1828985
Score = 84.2 bits (92), Expect = 6e-11
Identities = 225/337 (67%), Gaps = 14/337 (4%)
Strand=Plus/Minus
Query 288897 TCTGTTTGTTGCTGCCAATACAACAA-TAGAT---TCGGTTTGCTTAAATCCATCCATAC 288952
||| || || ||||||| ||||||| | ||| ||| | || ||| ||||||||
Sbjct 826244 TCTATTAGTGCCTGCCAAAACAACAACTTGATCACTCG---TACTGAAA-CCATCCATCT 826189
Query 288953 TTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCAC 289009
| || | ||||||||||| || | || |||||||| || | | | | |||
Sbjct 826188 CTACCAACAACTGATTAAGTGTGGCCTCACGCTCGTCATTTGATCCACCCATGGCACCAC 826129
Query 289010 CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG 289069
| || ||| ||| ||| || | |||||||| || || | ||||| | | || |
Sbjct 826128 CTT--TCCCTC-TTTCTTTCCCGATGGCATCAATCTCATCGACAAAAATGATGGAAGGTG 826072
Query 289070 AATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACA 289129
||| ||| || || |||||| || | ||||||||| || || | ||| ||| |||
Sbjct 826071 CCATTTTTCTGGCGTTTTCAAATAGATCGCGTACACGGGAGGCACCTACACCGACAAACA 826012
Query 289130 TTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTG 289189
|||| ||||||||||| | |||||| | |||| ||| ||||| || || |
Sbjct 826011 TTTCGACAAATTCAGACCCAGATACTGACAAAAATGGAACACCAGCTTCACCAGCCGTAG 825952
Query 289190 CCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
|| | || || | ||||| || || || ||||| ||
Sbjct 825951 CCTTAGCAAGTAAAGTCTTTCCGGTACCTGGTGGGCC 825915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817147416088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |