Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 114 4e-20 seq6 104 7e-17 seq1 84.2 6e-11 >seq5 Length=910667 Score = 114 bits (126), Expect = 4e-20 Identities = 222/326 (68%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| | ||| |||||||| | | || | |||||||| |||||||||||||| Sbjct 736579 ATCATAATGCACCATGATGTCTTCTAGAGCTTTAACCAAACGACGTTGAATATAACCAGT 736520 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | || || |||||||| ||||| ||||| |||| |||||||| || || ||||| Sbjct 736519 TTCTGCAGTCTTCACAGCTGTGTCAATCAGACCTTCACGTCCACCCATGGCGTGAAAGAA 736460 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | |||| || ||||| | | | || | ||||| ||||| | || || Sbjct 736459 AAATTCTTGAGGAGTGAGCCCTCTTAGGTACGAATTTTCAACAAAACCTTTAGATTCAGG 736400 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 |||| |||| ||| | |||||| || || |||| | || | || | | ||||| Sbjct 736399 AGAATAGTCGTCCTTAGAAAAGTGAGGTAGCGTCCGATCGGCAAATCCAAACGCAATACG 736340 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCA 302850 || || || ||| ||| || || | ||| | | |||||| | ||||| ||||| | Sbjct 736339 TTTACCCTCGACGGACTGTTGGCCAACGCAAGCAGACATCTGAGCGATATTAATAAATGA 736280 Query 302851 CTGCCCTTGGAGCCAGCATTTACCAT 302876 || || ||||| ||| ||||||| Sbjct 736279 --ACCTTTTGAGCCTGCACTTACCAT 736256 Score = 84.2 bits (92), Expect = 6e-11 Identities = 128/182 (70%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 303637 TGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTCCGCAACGTTC 303696 || |||||||| || |||||||| ||||| ||||| || || ||| ||| | |||| Sbjct 735489 TGCAAATTCATTTCGTCACCGTCGAAATCGGCATTGTATGGTGAGGTGACCGATAAGTTC 735430 Query 303697 ATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCATAGACATTCTG 303756 | | |||||| | |||| ||| || | || ||||||||||||| || Sbjct 735429 AATCTAAAAGTAGAATAAGGCAT---AACCTTAACTCTGTGGGCCATCATAGACATTTTG 735373 Query 303757 TGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATGACGATGAACC 303816 ||||| | || |||||||||||||| ||||| || ||| || | ||| || | |||| Sbjct 735372 TGTAGGGAGGGTTGACGATTGAAAAGAACGGGATCGTCGTCTATAATATGCCGTTCAACC 735313 Query 303817 TT 303818 || Sbjct 735312 TT 735311 >seq6 Length=784318 Score = 104 bits (114), Expect = 7e-17 Identities = 343/520 (66%), Gaps = 34/520 (7%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| |||| ||||||||||||||| |||||||| ||||| | | ||||||||| | Sbjct 547680 GCACCATGTGCAATCATACAATCACGTTCCATTTCTCCGAATCTCAAACCACCATCTCTT 547621 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACC---ATAGGACCGATGGAGCGGCTA 251601 | ||||| || ||||||| | || || ||| | |||||| || | | | Sbjct 547620 GATCTACCTTCCACAGGCTGTCTTGTTAGG---ACCTGTACAGGACCACGGGCTCTGGCA 547564 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 || || |||| |||||||| | ||||||||||| | | ||||||| ||| || Sbjct 547563 TGGATTTTGTCATCGACCATATGTCTCAGACGCTGGTAATAGGTTGGACCGAAGAATAT- 547505 Query 251662 CTCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718 | || | |||| | | | || || || | || ||||| ||||| ||| || Sbjct 547504 -TTGA-GCCATTAGTTTTTTACCCGTGTGACCATTGTACATGACTTCAAAACCACGCGAC 547447 Query 251719 TCATAACCAAGTTTCTGTAGC--TCTGAAGCAATATCACCAATCTTGAATTTGCTAAAAC 251776 | |||||| ||| |||| |||| | |||| | ||| || ||| | || Sbjct 547446 TGGTAACCATGTTCACGTAGAAGTCTGGA--AATACCGTCAA-CTGTAATGTCAGTGAAT 547390 Query 251777 TG-GTGCCGTCTCCGTAAAGACCCATTTGAATCAAC------ACTTTGCCTAAAAGTGTC 251829 | | | | || || | | ||| ||| || | ||||||| | | | Sbjct 547389 GGCGAGGCATCACCTTCATTACC----TGA--CAGCGCGGCTACTTTGCTCAGCAAACAC 547336 Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889 || ||| || || | |||||||||| ||||| || || || |||||||| | ||| Sbjct 547335 TCAATCAAGTGAGCAACAGTCATACGAGAAGGAATGGCGTGTGGGTTGATGATCAAATCG 547276 Query 251890 GGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT-CAATAA-TGTTTCCAATAG 251947 || || || || |||||||| |||||||||| ||| | ||| | | ||||||| Sbjct 547275 GGGACCACACCTTCTGCAGTGAAAGGCATATCCTC--CCTGCGATACGTAATACCAATAG 547218 Query 251948 TTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | || ||||| |||||||||||| |||||| ||||| || Sbjct 547217 TACCTTTTTGACCGTGACGAGAAGCGAACTTGTCACCTAT 547178 >seq1 Length=1828985 Score = 84.2 bits (92), Expect = 6e-11 Identities = 225/337 (67%), Gaps = 14/337 (4%) Strand=Plus/Minus Query 288897 TCTGTTTGTTGCTGCCAATACAACAA-TAGAT---TCGGTTTGCTTAAATCCATCCATAC 288952 ||| || || ||||||| ||||||| | ||| ||| | || ||| |||||||| Sbjct 826244 TCTATTAGTGCCTGCCAAAACAACAACTTGATCACTCG---TACTGAAA-CCATCCATCT 826189 Query 288953 TTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCAC 289009 | || | ||||||||||| || | || |||||||| || | | | | ||| Sbjct 826188 CTACCAACAACTGATTAAGTGTGGCCTCACGCTCGTCATTTGATCCACCCATGGCACCAC 826129 Query 289010 CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG 289069 | || ||| ||| ||| || | |||||||| || || | ||||| | | || | Sbjct 826128 CTT--TCCCTC-TTTCTTTCCCGATGGCATCAATCTCATCGACAAAAATGATGGAAGGTG 826072 Query 289070 AATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACA 289129 ||| ||| || || |||||| || | ||||||||| || || | ||| ||| ||| Sbjct 826071 CCATTTTTCTGGCGTTTTCAAATAGATCGCGTACACGGGAGGCACCTACACCGACAAACA 826012 Query 289130 TTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTG 289189 |||| ||||||||||| | |||||| | |||| ||| ||||| || || | Sbjct 826011 TTTCGACAAATTCAGACCCAGATACTGACAAAAATGGAACACCAGCTTCACCAGCCGTAG 825952 Query 289190 CCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 || | || || | ||||| || || || ||||| || Sbjct 825951 CCTTAGCAAGTAAAGTCTTTCCGGTACCTGGTGGGCC 825915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817147416088