Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 6e-24
seq3 111 1e-19
>seq1
Length=1828985
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || | || || || || ||||| || ||||| ||| | |
Sbjct 1304354 ATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCTTCG 1304413
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| ||||| || || || || ||
Sbjct 1304414 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAG 1304473
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| ||||| || ||||| |||| ||| |||| |||| || || ||
Sbjct 1304474 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304533
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||||||||| || ||||||||| | || ||||||| ||
Sbjct 1304534 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGG 1304580
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| | ||||| || || ||||| || ||||| || | |
Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || || || || || || || || || ||
Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| ||||| || ||||| |||| ||| |||| |||| || || |||
Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||||||||| || ||||||||| | ||||||| || ||
Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGG 1304808
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| | ||||| || || || || || || || ||| | |
Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| || || || || || || ||
Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||| ||||| || ||||| |||| ||| |||| |||| || || ||
Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| |||||||||||||| || |||||||||
Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGTG 1305019
>seq3
Length=955168
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || ||||||||||| || || || || || || || | |
Sbjct 273938 GATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTC 273879
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || ||||| ||||| || ||||| || ||
Sbjct 273878 TGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCA 273819
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||||||| || || ||| |||| || |||| |||| || || ||
Sbjct 273818 ACAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 273759
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||| || |||||||| || | ||||||||| | ||||| | || || ||
Sbjct 273758 CATCCAGAAGGAATCCACCTTGCACTTGGTGCTAAGATTGAGAGGTGGTGG 273708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897465030720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |