Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 seq9 113 3e-20 >seq1 Length=1828985 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || ||||| ||||| || || || || | | || | ||| Sbjct 1304565 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCT 1304506 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| || ||| | |||||||||||||| || || |||||||| || |||||| Sbjct 1304505 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCT 1304446 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || || | || | |||||| ||| ||| ||||| ||||| || || Sbjct 1304445 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGT 1304387 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || || || ||||| ||||||||||| Sbjct 1304386 CTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || ||||| ||||| ||||| || || | | || | ||| Sbjct 1304793 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCT 1304734 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| || ||| | |||||||||||||| || || ||||||||||| || || Sbjct 1304733 TCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCC 1304674 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || || | || | |||||||||| || ||||| ||||| || || Sbjct 1304673 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGT 1304615 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| ||||| |||||||| Sbjct 1304614 CTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || || ||||| ||||| || || || || | | || | ||| Sbjct 1305021 AGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCT 1304962 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| || ||| | |||||||||||||| || || ||||||||||| |||||| Sbjct 1304961 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT 1304902 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || || | || | |||||||||| ||| || || ||||| || || Sbjct 1304901 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGT 1304843 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| || || |||||||| Sbjct 1304842 CTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 >seq9 Length=718525 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| || || ||||| || || | Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || || || || || ||||| | |||||||| ||||| || || ||| Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| || | |||||| | || | ||||| ||| ||| || Sbjct 427383 ATACCCTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 427441 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 ||| | ||| || || || ||||| ||||| || ||||| Sbjct 427442 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219087323384