Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq9 113 3e-20
>seq1
Length=1828985
Score = 131 bits (144), Expect = 1e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || || ||||| ||||| || || || || | | || | |||
Sbjct 1304565 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCT 1304506
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | |||||| || ||| | |||||||||||||| || || |||||||| || ||||||
Sbjct 1304505 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCT 1304446
Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| || | || || | || | |||||| ||| ||| ||||| ||||| || ||
Sbjct 1304445 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGT 1304387
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| || || || ||||| |||||||||||
Sbjct 1304386 CTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
Score = 129 bits (142), Expect = 5e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || || ||||| ||||| ||||| || || | | || | |||
Sbjct 1304793 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCT 1304734
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | |||||| || ||| | |||||||||||||| || || ||||||||||| || ||
Sbjct 1304733 TCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCC 1304674
Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| || | || || | || | |||||||||| || ||||| ||||| || ||
Sbjct 1304673 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGT 1304615
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || |||||||| ||||| ||||||||
Sbjct 1304614 CTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 129 bits (142), Expect = 5e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || || ||||| ||||| || || || || | | || | |||
Sbjct 1305021 AGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCT 1304962
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | |||||| || ||| | |||||||||||||| || || ||||||||||| ||||||
Sbjct 1304961 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT 1304902
Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| || | || || | || | |||||||||| ||| || || ||||| || ||
Sbjct 1304901 TG-AATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGT 1304843
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || |||||||| || || ||||||||
Sbjct 1304842 CTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
>seq9
Length=718525
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| || || ||||| || || |
Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || || || || || ||||| | |||||||| ||||| || || |||
Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 427383 ATACCCTCCTTGTCTTG-AATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 427441
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| ||||| || |||||
Sbjct 427442 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219087323384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |