Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 178 3e-39 seq9 163 6e-35 seq3 141 2e-28 >seq1 Length=1828985 Score = 178 bits (196), Expect = 3e-39 Identities = 171/217 (79%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| ||||| || || ||||| || ||||| | | |||| || ||| Sbjct 1304565 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCT 1304506 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | ||||||||| ||||| || | |||||| || ||||| || || |||||||| ||| Sbjct 1304505 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCT 1304446 Query 82719 TGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 |||||||| ||| || || || ||||| || || || ||| ||||||| ||| || || Sbjct 1304445 TGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGT 1304387 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 ||| || ||||| ||||||||||| ||||||||| || Sbjct 1304386 CTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTTT 1304350 Score = 156 bits (172), Expect = 8e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| ||||| || |||||||| || ||||| | | |||| || ||| Sbjct 1305021 AGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCT 1304962 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | ||||||||| ||||| || | |||||| || ||||| || || || ||||| ||| Sbjct 1304961 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT 1304902 Query 82719 TGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 |||||| ||||| || || || ||||| || ||| || ||| || || | ||| || || Sbjct 1304901 TGAATC-TTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGT 1304843 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || ||||| || || || || |||||||| Sbjct 1304842 CTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 >seq9 Length=718525 Score = 163 bits (180), Expect = 6e-35 Identities = 168/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || || ||||||| ||| ||||| ||||| || || || || | Sbjct 427261 TACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGG 427320 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | |||| |||||||| || || || ||||| ||||| | ||| || || || |||| Sbjct 427321 ACAAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAG 427380 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||||||||| | || ||||| ||||| || || || ||| | Sbjct 427381 GAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAA 427440 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 |||||||||| || ||||| || ||||| ||||| ||||| Sbjct 427441 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480 >seq3 Length=955168 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || || ||||||| || ||||| ||||| || || || || || Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | |||| |||||||| | || || ||||||||||| | ||| ||||| || ||||| Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || |||||||| | || ||||| || || || ||| || || || Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || |||||||| || || | ||||| || || || ||||| Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826898088136