Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 3e-39
seq9 163 6e-35
seq3 141 2e-28
>seq1
Length=1828985
Score = 178 bits (196), Expect = 3e-39
Identities = 171/217 (79%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| ||||| ||||| || || ||||| || ||||| | | |||| || |||
Sbjct 1304565 AGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCT 1304506
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | ||||||||| ||||| || | |||||| || ||||| || || |||||||| |||
Sbjct 1304505 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCT 1304446
Query 82719 TGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|||||||| ||| || || || ||||| || || || ||| ||||||| ||| || ||
Sbjct 1304445 TGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGT 1304387
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
||| || ||||| ||||||||||| ||||||||| ||
Sbjct 1304386 CTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTTT 1304350
Score = 156 bits (172), Expect = 8e-33
Identities = 164/213 (77%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| ||||| ||||| || |||||||| || ||||| | | |||| || |||
Sbjct 1305021 AGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCT 1304962
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | ||||||||| ||||| || | |||||| || ||||| || || || ||||| |||
Sbjct 1304961 TCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT 1304902
Query 82719 TGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|||||| ||||| || || || ||||| || ||| || ||| || || | ||| || ||
Sbjct 1304901 TGAATC-TTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGT 1304843
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || ||||| || || || || ||||||||
Sbjct 1304842 CTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
>seq9
Length=718525
Score = 163 bits (180), Expect = 6e-35
Identities = 168/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||||| ||| ||||| ||||| || || || || |
Sbjct 427261 TACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGG 427320
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||| |||||||| || || || ||||| ||||| | ||| || || || ||||
Sbjct 427321 ACAAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAG 427380
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| ||||||||||| | || ||||| ||||| || || || ||| |
Sbjct 427381 GAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAA 427440
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 427441 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
>seq3
Length=955168
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| || ||||| ||||| || || || || ||
Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | |||| |||||||| | || || ||||||||||| | ||| ||||| || |||||
Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| || |||||||| | || ||||| || || || ||| || || ||
Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || |||||||| || || | ||||| || || || |||||
Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826898088136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |