Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq10 167 6e-36 seq1 111 4e-19 seq6 98.7 2e-15 >seq10 Length=558261 Score = 167 bits (184), Expect = 6e-36 Identities = 470/710 (66%), Gaps = 29/710 (4%) Strand=Plus/Minus Query 110466 ATTCATGCTACTCCTACCCTATTTAACGCAGGAAC--TAATGGAGGACAATTGGCTTCTT 110523 |||||||| | || ||||| |||||||| || || | | || || || | || | Sbjct 195433 ATTCATGCATCACCGACCCTTTTTAACGCTGGTACGGTGAACCAGTACC--TGTCATCCT 195376 Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA 110583 | ||||| | || || | || ||||| || || ||||||||| | ||| | ||| Sbjct 195375 GTTTTCTAGTGGGCATGATGGAGGATTCAATCGATGGTATTTATCGCACGCTTCATAAAA 195316 Query 110584 CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAA 110643 ||||| | || || ||| | ||||||||||||| ||||| || |||| | || Sbjct 195315 CTGCTATGATCTCGAAAGGCGCTGGAGGAATTGGGATTCATGTATCGAATATCAGAGGAA 195256 Query 110644 AAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703 || | | || || | || || | |||| ||||||||| || ||||| || | Sbjct 195255 CGGGCTCTTACATATCAGGGTCCAACGGGACGTCAAATGGACTTGTACCGATGTTGAGGG 195196 Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAA----ATG-GCTCATT 110758 | |||||| | ||||||| |||||| | || ||||| || | | | | ||| || Sbjct 195195 TTTTCAACAATACTGCAAGATATGTTGACCAGGGTGGAAATAAACGCCCAGGTGCTT-TT 195137 Query 110759 TGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAA 110818 ||| ||||| | || || |||||||| || | || || |||||| ||||||| ||||| Sbjct 195136 TGC-ATCTACTTAGAGCCATGGCATTCGGACGTTTTCGATTTCTTACAACTTCGCAAAAA 195078 Query 110819 TCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTT 110878 || || || ||| ||| || || ||| |||| | || | |||||| ||||| | Sbjct 195077 CCATGGCAAAGAGGAATTAAGGGCGCGCGATCTATTCTGCGCCCTATGGATTCCAGATAT 195018 Query 110879 ATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCC 110938 |||||||||||||| || || |||| | |||||| | | | || || ||| Sbjct 195017 CTTCATGAAACGTGTCCAGGACAATGCCTCTTGGTCTTTATTTTCGCCAGATGAAGTTCC 194958 Query 110939 TGGTCTATCTGA-TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 ||| || || ||| ||||| ||||||||||| | ||||||| || | Sbjct 194957 TGGATTACAGGACTGT-TATGGTGAAGAGTTTGAAAGGATGTACGAAAGCTACG------ 194905 Query 110998 AAGGCAAGTT----TCGCAAACAA---ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTT 111050 |||| | || || |||| || | | ||| || | |||||| | ||||| | Sbjct 194904 -AGGCCACTTTAACTCCCAAAAAAGTGGTACAAGCACAGAAGCTTTGGAGCGAAATCTTA 194846 Query 111051 GAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-TCATATTAATCGCAA 111109 || |||||||| ||||| ||||| || | || ||||| || | ||| || Sbjct 194845 CAAAGCCAAGTTGAGACTGGTGGTCCTTTCATGCTCTACAAAGACTCGT-GCAATACAAA 194787 Query 111110 ATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || ||||||| || | || |||||||| || ||||||||||||| Sbjct 194786 GTCAAATCAAAAAAACCTGGGGACAATTAAATCATCCAATTTGTGCTGTG 194737 >seq1 Length=1828985 Score = 111 bits (122), Expect = 4e-19 Identities = 305/467 (65%), Gaps = 3/467 (1%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || |||||| | | | || || || || || || || || ||||| || || | ||| Sbjct 253536 TCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATTTACGACACTTTGAAA 253595 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 ||| |||| | || ||||||| | || || || || | || |||| | |||||| Sbjct 253596 GAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCATATTCACAACATTCGC 253655 Query 110640 TCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTA 110699 || | || | | || || | || || |||| | || ||| | || ||| | Sbjct 253656 TCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGGTCTTATCCCCATGATT 253715 Query 110700 AGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCA 110756 | ||||||||| ||||||| || || ||||||||||||| | || || | Sbjct 253716 CGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAACAAAAGACCAGGTGCT 253775 Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||| | || || || || ||||||||||| || || || || | || | || ||| Sbjct 253776 TTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGATTTTGTTGACATCCGCAAA 253835 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 || || || || ||| | || | ||||| || || | |||||| | || Sbjct 253836 AACCACGGTAAGGAGGAAATTCGTGCCAGAGATTTGTTCCCAGCTCTTTGGATTCCTGAC 253895 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 || || ||| || | || || ||||||||| ||| |||| | | ||| | || Sbjct 253896 TTGTTTATGCAAAGGGTCCAGGAAAATGGCGATTGGACTCTGTTCTCTCCAAGTGAAGCT 253955 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983 || || || |||| || |||||| ||||||||||| |||||||| Sbjct 253956 CCAGGACTTGCTGACGTTTATGGAGCAGAGTTTGAAGCTCTTTACGA 254002 >seq6 Length=784318 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 131794 AATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC 131853 ||| ||| | || || ||||||| || | ||||||||||| || || | ||||| Sbjct 311124 AATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCAAGACGAAGAAGC--ACTTTTC 311067 Query 131854 --TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGT 131911 | |||| | || |||||||| |||||||||| | || || |||||| |||| Sbjct 311066 GGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCA 311007 Query 131912 GCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTC 131971 || || || ||||| || ||| || |||||||| || | |||| |||||| | || Sbjct 311006 GCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTC 310947 Query 131972 ATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || | |||||||||| || ||||| || ||||| Sbjct 310946 ATTTGCAGAGATGAAGGTTTACATACGGATTTTGC 310912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812435055064