Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq10 167 6e-36
seq1 111 4e-19
seq6 98.7 2e-15
>seq10
Length=558261
Score = 167 bits (184), Expect = 6e-36
Identities = 470/710 (66%), Gaps = 29/710 (4%)
Strand=Plus/Minus
Query 110466 ATTCATGCTACTCCTACCCTATTTAACGCAGGAAC--TAATGGAGGACAATTGGCTTCTT 110523
|||||||| | || ||||| |||||||| || || | | || || || | || |
Sbjct 195433 ATTCATGCATCACCGACCCTTTTTAACGCTGGTACGGTGAACCAGTACC--TGTCATCCT 195376
Query 110524 GCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAA 110583
| ||||| | || || | || ||||| || || ||||||||| | ||| | |||
Sbjct 195375 GTTTTCTAGTGGGCATGATGGAGGATTCAATCGATGGTATTTATCGCACGCTTCATAAAA 195316
Query 110584 CTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAA 110643
||||| | || || ||| | ||||||||||||| ||||| || |||| | ||
Sbjct 195315 CTGCTATGATCTCGAAAGGCGCTGGAGGAATTGGGATTCATGTATCGAATATCAGAGGAA 195256
Query 110644 AAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703
|| | | || || | || || | |||| ||||||||| || ||||| || |
Sbjct 195255 CGGGCTCTTACATATCAGGGTCCAACGGGACGTCAAATGGACTTGTACCGATGTTGAGGG 195196
Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAA----ATG-GCTCATT 110758
| |||||| | ||||||| |||||| | || ||||| || | | | | ||| ||
Sbjct 195195 TTTTCAACAATACTGCAAGATATGTTGACCAGGGTGGAAATAAACGCCCAGGTGCTT-TT 195137
Query 110759 TGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAA 110818
||| ||||| | || || |||||||| || | || || |||||| ||||||| |||||
Sbjct 195136 TGC-ATCTACTTAGAGCCATGGCATTCGGACGTTTTCGATTTCTTACAACTTCGCAAAAA 195078
Query 110819 TCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTT 110878
|| || || ||| ||| || || ||| |||| | || | |||||| ||||| |
Sbjct 195077 CCATGGCAAAGAGGAATTAAGGGCGCGCGATCTATTCTGCGCCCTATGGATTCCAGATAT 195018
Query 110879 ATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCC 110938
|||||||||||||| || || |||| | |||||| | | | || || |||
Sbjct 195017 CTTCATGAAACGTGTCCAGGACAATGCCTCTTGGTCTTTATTTTCGCCAGATGAAGTTCC 194958
Query 110939 TGGTCTATCTGA-TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997
||| || || ||| ||||| ||||||||||| | ||||||| || |
Sbjct 194957 TGGATTACAGGACTGT-TATGGTGAAGAGTTTGAAAGGATGTACGAAAGCTACG------ 194905
Query 110998 AAGGCAAGTT----TCGCAAACAA---ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTT 111050
|||| | || || |||| || | | ||| || | |||||| | ||||| |
Sbjct 194904 -AGGCCACTTTAACTCCCAAAAAAGTGGTACAAGCACAGAAGCTTTGGAGCGAAATCTTA 194846
Query 111051 GAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGA-TCATATTAATCGCAA 111109
|| |||||||| ||||| ||||| || | || ||||| || | ||| ||
Sbjct 194845 CAAAGCCAAGTTGAGACTGGTGGTCCTTTCATGCTCTACAAAGACTCGT-GCAATACAAA 194787
Query 111110 ATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||||| || | || |||||||| || |||||||||||||
Sbjct 194786 GTCAAATCAAAAAAACCTGGGGACAATTAAATCATCCAATTTGTGCTGTG 194737
>seq1
Length=1828985
Score = 111 bits (122), Expect = 4e-19
Identities = 305/467 (65%), Gaps = 3/467 (1%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| |||||| | | | || || || || || || || || ||||| || || | |||
Sbjct 253536 TCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATTTACGACACTTTGAAA 253595
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639
||| |||| | || ||||||| | || || || || | || |||| | ||||||
Sbjct 253596 GAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCATATTCACAACATTCGC 253655
Query 110640 TCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTA 110699
|| | || | | || || | || || |||| | || ||| | || ||| |
Sbjct 253656 TCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGGTCTTATCCCCATGATT 253715
Query 110700 AGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCA 110756
| ||||||||| ||||||| || || ||||||||||||| | || || |
Sbjct 253716 CGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAACAAAAGACCAGGTGCT 253775
Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816
|||||| | || || || || ||||||||||| || || || || | || | || |||
Sbjct 253776 TTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGATTTTGTTGACATCCGCAAA 253835
Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876
|| || || || ||| | || | ||||| || || | |||||| | ||
Sbjct 253836 AACCACGGTAAGGAGGAAATTCGTGCCAGAGATTTGTTCCCAGCTCTTTGGATTCCTGAC 253895
Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936
|| || ||| || | || || ||||||||| ||| |||| | | ||| | ||
Sbjct 253896 TTGTTTATGCAAAGGGTCCAGGAAAATGGCGATTGGACTCTGTTCTCTCCAAGTGAAGCT 253955
Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983
|| || || |||| || |||||| ||||||||||| ||||||||
Sbjct 253956 CCAGGACTTGCTGACGTTTATGGAGCAGAGTTTGAAGCTCTTTACGA 254002
>seq6
Length=784318
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 131794 AATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTC 131853
||| ||| | || || ||||||| || | ||||||||||| || || | |||||
Sbjct 311124 AATCAAAGAAAAGGCTCAATGGGCCATAAGGTGGATTCAAGACGAAGAAGC--ACTTTTC 311067
Query 131854 --TACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGT 131911
| |||| | || |||||||| |||||||||| | || || |||||| ||||
Sbjct 311066 GGTGAAAGATTGGTGGCTTTTGCAGCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCA 311007
Query 131912 GCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTC 131971
|| || || ||||| || ||| || |||||||| || | |||| |||||| | ||
Sbjct 311006 GCCATTTTCTGGCTCAAAAAGAAAGGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTC 310947
Query 131972 ATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| | |||||||||| || ||||| || |||||
Sbjct 310946 ATTTGCAGAGATGAAGGTTTACATACGGATTTTGC 310912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812435055064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |