Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 5e-17
seq1 100 2e-16
>seq3
Length=955168
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || |||||| || | ||| || || || |||||||| || |
Sbjct 273709 CACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCG 273768
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| ||||| || || || ||||| ||||| | ||| || || | |
Sbjct 273769 ACAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAG 273828
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| ||| || | | |||| ||| | |||||| || |||
Sbjct 273829 GAATACCTTCCTTGTCCTGAATCTT-GGACTTGACATTGTCGATGGTGTCAGAAGACTCC 273887
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| |||||||| ||||| |||| || || || || || |||||
Sbjct 273888 ACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937
>seq1
Length=1828985
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || | | |||||| || ||||| || ||||| || ||||| || ||
Sbjct 1304581 ACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGA 1304522
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || |||||||||||||| ||||||||||| | ||||| ||| | ||
Sbjct 1304521 CAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304462
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| || ||| || | ||| | ||||| |||||||
Sbjct 1304461 AATACCTTCCTTGTCTTGAATCTTGCTCTTC-ACGTTGTCAATAGTGTCCGAAGATTCCA 1304403
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || || || || || || |||||||| ||||||||
Sbjct 1304402 CTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354
Score = 100 bits (110), Expect = 2e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || ||||| || |||||||| ||||| || || | || | | || ||
Sbjct 1305019 CACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304960
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|||||||||||| ||||||||||| | ||||| ||| | || | ||| || |||||
Sbjct 1304959 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 1304900
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||| || ||| || | ||| | ||||| |||||||| || | ||||| || |
Sbjct 1304899 AATCTTGCTCTTC-ACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCT 1304841
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||| || || |||||||||
Sbjct 1304840 TTCCGGTCAAGGTTTTCACGAAAATCTGCATA 1304809
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||| | | |||||| || ||||| || ||||| |||||||| || ||
Sbjct 1304809 ACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGA 1304750
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || |||||||||||||| ||||||||||| | ||||| ||| | ||
Sbjct 1304749 CAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304690
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || || || ||| || ||| || | ||| | ||||| || ||||
Sbjct 1304689 AATACCCTCCTTATCCTGAATCTTGCTCTTC-ACGTTGTCAATAGTGTCAGAAGACTCCA 1304631
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || || || ||||| ||||| |||||||||
Sbjct 1304630 CTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCATA 1304581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703903854080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |