Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3 102 5e-17 seq1 100 2e-16 >seq3 Length=955168 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || |||||| || | ||| || || || |||||||| || | Sbjct 273709 CACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCG 273768 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | |||| ||||| || || || ||||| ||||| | ||| || || | | Sbjct 273769 ACAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAG 273828 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| ||| || | | |||| ||| | |||||| || ||| Sbjct 273829 GAATACCTTCCTTGTCCTGAATCTT-GGACTTGACATTGTCGATGGTGTCAGAAGACTCC 273887 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| |||||||| ||||| |||| || || || || || ||||| Sbjct 273888 ACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937 >seq1 Length=1828985 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || | | |||||| || ||||| || ||||| || ||||| || || Sbjct 1304581 ACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGA 1304522 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || |||||||||||||| ||||||||||| | ||||| ||| | || Sbjct 1304521 CAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304462 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || ||| || | ||| | ||||| ||||||| Sbjct 1304461 AATACCTTCCTTGTCTTGAATCTTGCTCTTC-ACGTTGTCAATAGTGTCCGAAGATTCCA 1304403 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || || || || || |||||||| |||||||| Sbjct 1304402 CTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || ||||| || |||||||| ||||| || || | || | | || || Sbjct 1305019 CACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304960 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 |||||||||||| ||||||||||| | ||||| ||| | || | ||| || ||||| Sbjct 1304959 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 1304900 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| || ||| || | ||| | ||||| |||||||| || | ||||| || | Sbjct 1304899 AATCTTGCTCTTC-ACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCT 1304841 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || ||||| || || ||||||||| Sbjct 1304840 TTCCGGTCAAGGTTTTCACGAAAATCTGCATA 1304809 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | | |||||| || ||||| || ||||| |||||||| || || Sbjct 1304809 ACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGA 1304750 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || |||||||||||||| ||||||||||| | ||||| ||| | || Sbjct 1304749 CAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304690 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || ||| || ||| || | ||| | ||||| || |||| Sbjct 1304689 AATACCCTCCTTATCCTGAATCTTGCTCTTC-ACGTTGTCAATAGTGTCAGAAGACTCCA 1304631 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || || ||||| ||||| ||||||||| Sbjct 1304630 CTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCATA 1304581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703903854080