Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 3e-21
seq9 114 3e-20
seq3 105 2e-17
>seq1
Length=1828985
Score = 118 bits (130), Expect = 3e-21
Identities = 165/228 (72%), Gaps = 5/228 (2%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA 206222
|||||| ||||| ||||| ||| || | || ||||| || || ||| ||||||||||
Sbjct 1304351 AAAATG---CAGAT-TTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGA 1304406
Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282
| ||| ||||| | || || ||| ||||||||||| || ||||| ||| ||
Sbjct 1304407 ATCTTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACC 1304466
Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342
||| |||||| | || || || ||||| || ||||||||||| || |||||| | ||
Sbjct 1304467 AGACCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGA 1304526
Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| |||| || || || ||||| ||| | || | ||||| ||
Sbjct 1304527 CTACAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCG 1304574
Score = 111 bits (122), Expect = 4e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | || ||||| || || ||| |||||||||| |||||||
Sbjct 1304585 CAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCTGAC 1304644
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || ||| || ||| |||
Sbjct 1304645 ACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAGCAA 1304704
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || || || ||||| || ||||||||||| || |||||| | || |||||| ||
Sbjct 1304705 AGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATC 1304764
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
|| || || || ||||| |||
Sbjct 1304765 CAAAAGGAATCGACTCTCCAC 1304785
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || ||||| || |||||| | || |||||| ||||||||| | ||
Sbjct 1304825 AAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCTGACACTATTGACAAC 1304884
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || || ||| || ||| |||||| | || ||
Sbjct 1304885 GTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAGCAAAGATTGATTTTT 1304944
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| ||||| || ||||||||||| || |||||| | || ||||| | || || || ||
Sbjct 1304945 GCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAATATACAAAAGGAATCG 1305004
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||| | || | ||||| ||
Sbjct 1305005 ACTCTCCACTTGGTGCTCAGACTACG 1305030
>seq9
Length=718525
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||| ||||| |
Sbjct 427481 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCAT 427422
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| ||||||||||| || || || ||| || ||| || ||| |
Sbjct 427421 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATT 427362
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||||| || |||||| | ||||| || || || ||| |||| |||||| |||||||
Sbjct 427361 GATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAA 427302
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || ||| | ||| | || ||||||
Sbjct 427301 GGAATCCACTTTGCACTTGGTCTTGAGA 427274
>seq3
Length=955168
Score = 105 bits (116), Expect = 2e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || |||||||| | || ||||| ||||||||| ||||
Sbjct 273923 CAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAA 273864
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || ||||| ||| || ||| || ||| | |||||
Sbjct 273863 TGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAGAGATTGATCTT 273804
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || |||||||||||||| || || |||||| | || |||||| ||||||| || ||
Sbjct 273803 TGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAGAAGGAATC 273744
Query 206364 TAC 206366
||
Sbjct 273743 CAC 273741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820436590104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |