Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 118 3e-21 seq9 114 3e-20 seq3 105 2e-17 >seq1 Length=1828985 Score = 118 bits (130), Expect = 3e-21 Identities = 165/228 (72%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA 206222 |||||| ||||| ||||| ||| || | || ||||| || || ||| |||||||||| Sbjct 1304351 AAAATG---CAGAT-TTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGA 1304406 Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | ||| ||||| | || || ||| ||||||||||| || ||||| ||| || Sbjct 1304407 ATCTTCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACC 1304466 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 ||| |||||| | || || || ||||| || ||||||||||| || |||||| | || Sbjct 1304467 AGACCAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGA 1304526 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| |||| || || || ||||| ||| | || | ||||| || Sbjct 1304527 CTACAATATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCG 1304574 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || ||||| || || ||| |||||||||| ||||||| Sbjct 1304585 CAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCTGAC 1304644 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || ||| || ||| ||| Sbjct 1304645 ACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAGCAA 1304704 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || ||||| || ||||||||||| || |||||| | || |||||| || Sbjct 1304705 AGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATC 1304764 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || || ||||| ||| Sbjct 1304765 CAAAAGGAATCGACTCTCCAC 1304785 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || ||||| || |||||| | || |||||| ||||||||| | || Sbjct 1304825 AAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCTGACACTATTGACAAC 1304884 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || || || ||| || ||| |||||| | || || Sbjct 1304885 GTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAGCAAAGATTGATTTTT 1304944 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || ||||||||||| || |||||| | || ||||| | || || || || Sbjct 1304945 GCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAATATACAAAAGGAATCG 1305004 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| | || | ||||| || Sbjct 1305005 ACTCTCCACTTGGTGCTCAGACTACG 1305030 >seq9 Length=718525 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||| ||||| | Sbjct 427481 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCAT 427422 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| ||||||||||| || || || ||| || ||| || ||| | Sbjct 427421 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATT 427362 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||||| || |||||| | ||||| || || || ||| |||| |||||| ||||||| Sbjct 427361 GATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAA 427302 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || ||| | ||| | || |||||| Sbjct 427301 GGAATCCACTTTGCACTTGGTCTTGAGA 427274 >seq3 Length=955168 Score = 105 bits (116), Expect = 2e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || |||||||| | || ||||| ||||||||| |||| Sbjct 273923 CAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAA 273864 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || ||||| ||| || ||| || ||| | ||||| Sbjct 273863 TGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAACAGAGATTGATCTT 273804 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||||||||||| || || |||||| | || |||||| ||||||| || || Sbjct 273803 TGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAGAAGGAATC 273744 Query 206364 TAC 206366 || Sbjct 273743 CAC 273741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820436590104