Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq9 123 2e-23
seq1 116 3e-21
>seq9
Length=718525
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| ||||| || || || ||||| || |||||||| |||| |
Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| || ||||||||||| || || ||||| | ||||||||| | ||||
Sbjct 427323 AAGGTTCTGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGA 427382
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||||||| ||||| ||| | | | | | ||||| ||||| ||
Sbjct 427383 ATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACT 427442
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| ||||| || || |||||
Sbjct 427443 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
>seq1
Length=1828985
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || || | |||||| || | || |||||||| |||||||| || | |
Sbjct 1304808 CCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 1304749
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| || || |||||||| ||||| | |||||||| | |||
Sbjct 1304748 AAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304689
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCAC 35688
| | |||||| ||| ||||| ||||| |||| || ||||| || |||||
Sbjct 1304688 ATACCCTCCTTATCCTGAATCTTGCTCTTCAC-GTTGTCAATAGTGTCAGAAGACTCCAC 1304630
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || || || || ||||| ||||||||||| ||||||||
Sbjct 1304629 TTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| || |||| || | |||||| || | || |||||||| || ||||| || | |
Sbjct 1305036 CCGCCCCGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGAC 1304977
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| || || || ||||| ||||| | |||||||| | |||
Sbjct 1304976 AAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGA 1304917
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACC-GTGTCGCTCGATTCCAC 35688
| | ||||||||| ||||| ||||| |||| || ||||| ||||||||
Sbjct 1304916 ATACCCTCCTTGTCTTGAATCTTGCTCTTCAC-GTTGTCAATAGTGTCAGAAGATTCCAC 1304858
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || || ||||| |||||||| || ||||||||
Sbjct 1304857 CTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793464761920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |