Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 9e-29
seq3 123 3e-23
seq9 111 2e-19
>seq1
Length=1828985
Score = 141 bits (156), Expect = 9e-29
Identities = 174/234 (74%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| | ||| | ||| || || ||||||||||| || |||||||| | ||| | | ||
Sbjct 1304571 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTG 1304512
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || || | ||||| |||||||||||||| | ||||| || || || || |||||
Sbjct 1304511 CCA-TCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTC 1304453
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| |||||||| || || || ||| | ||||| || |||||||| || |||||
Sbjct 1304452 CTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGT 1304393
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTTCAA 134728
|||||| || || || ||||| || || ||||| |||||||| | ||||||||
Sbjct 1304392 AATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT-TCCTTGTTCAA 1304340
Score = 131 bits (144), Expect = 2e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| | ||| | ||| || || ||||||||||| || |||||||| | ||| | | ||
Sbjct 1305027 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTG 1304968
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || || | ||||| |||||||||||||| | ||||| || || || || || ||
Sbjct 1304967 CCA-TCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTC 1304909
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| |||||||| || || || ||| | ||||| || |||||||| || |||||
Sbjct 1304908 CTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGT 1304849
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| |||||||| |||||
Sbjct 1304848 GATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 122 bits (134), Expect = 9e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGT 134562
||| | ||| || || ||||||||||| ||||||||||| | ||| | | || | || |
Sbjct 1304791 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA-TCTT 1304733
Query 134563 CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622
| | ||||| || ||||||||||| | ||||| || || || || || || || || |
Sbjct 1304732 CCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCT 1304673
Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682
|||| || || || ||| | ||||| || || ||||| || ||||||||||| |
Sbjct 1304672 GAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCT 1304613
Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || ||||| || ||||| |||||
Sbjct 1304612 TTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
>seq3
Length=955168
Score = 123 bits (136), Expect = 3e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || | ||| | ||| | ||||||||||| || ||||||||||| | |
Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | ||| || || ||||| ||||| | ||| || || || ||
Sbjct 273771 AAAGTTCTGCC-GTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || ||||| || ||||| ||| | ||||| || || |||||
Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || |||||||||| || || |||||||||||||| |||
Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTTG 273941
>seq9
Length=718525
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | ||||||||||| || ||||||||||| | |
Sbjct 427263 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 427322
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || ||||| || || || || ||||| | |||||| || || ||
Sbjct 427323 AAGGTTCTG-CCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGG 427381
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 427382 AATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAAC 427441
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || || || || || |||
Sbjct 427442 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 427481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398248380480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |