Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6 212 9e-50 seq1 188 1e-42 seq10 95.1 2e-14 >seq6 Length=784318 Score = 212 bits (234), Expect = 9e-50 Identities = 595/903 (66%), Gaps = 14/903 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || ||| | ||| ||||||||||| || || || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||||||||| ||||| | | | ||||| || | | || || | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 |||||||| ||||||||||| | ||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 39506 TTAACTGGTAGAGCCTCCGTTAGA-AACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || || || || || | | | ||| || | | || || || |||||||| || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCTGCT-CAATTTCAACCGCCTCTGTAATGAT 310856 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | || | | | | || || || ||| ||||| || || || || Sbjct 310857 TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAA 310916 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 || ||||| || |||||||| | ||| | || || |||||||| | || ||||| Sbjct 310917 ATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCAT 310976 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 | ||| |||||||||||| || ||||| |||||||| || || || || | ||||| Sbjct 310977 CAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTC 311036 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA----CTTGTATCATTATGTATCCA-C 39799 || |||||||| || || | ||| || ||| || ||| | || | || ||||| | Sbjct 311037 AACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCT-TCGTCTTGAATCCACC 311095 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 || || ||||| | ||| || |||||| | || || ||||| || ||||| || | Sbjct 311096 TTATG-GCCCATTGAGCCTT-TTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAA 311153 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 | | | |||| | || || | || ||||| || | || || | || || Sbjct 311154 AAACTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGA 311213 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || |||||||| ||| || |||||||||||||||||| | ||||| | | |||| || Sbjct 311214 GTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCAC 311273 Query 39979 CTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAA 40038 || | | | || ||||| ||| |||||| || ||||| ||||| || |||||||| Sbjct 311274 TTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAA 311333 Query 40039 TGCCAATACATGTTTAATAAAATATTTTTCA---TCGGGTGTCAATTTATTCCAGTCATT 40095 || | || | | ||||| |||| ||| | || ||||| || | Sbjct 311334 CGCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGTTCATGCGATTGTTCCAATCGTG 311393 Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 ||||| || |||| ||| | ||| || || ||||||||||||||||| || ||| || Sbjct 311394 TATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATA 311453 Query 40156 CATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTTTGC 40215 | ||| || ||| | || | || || || | ||| ||||| | ||||| ||| Sbjct 311454 GGCTTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCTGC 311513 Query 40216 AAG 40218 || Sbjct 311514 CAG 311516 >seq1 Length=1828985 Score = 188 bits (208), Expect = 1e-42 Identities = 582/899 (65%), Gaps = 10/899 (1%) Strand=Plus/Minus Query 69516 TTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGA 69575 ||| || || |||| |||| ||| | | ||| ||| |||| ||||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 69576 CCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAA 69635 ||| | ||| |||| || | || |||||| | || ||||||||||||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 | |||||||| | | |||| || || || ||||| | || | ||| || | Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAA 253812 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 ||| || ||||||||||| || || || | || | | || |||| ||| || || || Sbjct 253811 AATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACC 253752 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||||| | ||| | |||||||| || |||| | | ||| || |||| ||| || || Sbjct 253751 TTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGA 253692 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 | || ||||| || | ||| ||| || | | |||||| || |||| | || Sbjct 253691 AGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAATCC 253632 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || || || || |||||||||| | |||||| |||||| ||||| || || || || Sbjct 253631 GATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTC 253572 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995 || || ||| |||| | | ||| || ||||| || | || ||| || Sbjct 253571 GATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACC 253512 Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055 ||||| || || |||||||| || || ||||| | || || | ||||||||| || Sbjct 253511 GGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGT 253452 Query 70056 TT-CAATA----GCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || ||||| | ||| | | || |||||| || | || |||||||| | | Sbjct 253451 TTCCAATACCCTGGCGATGTTGTTGCC-----ATGAATACCGACAGCCACACGCATAATC 253397 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 | ||| || |||| |||| | | || ||| | | ||||| || || || Sbjct 253396 AAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAGG 253337 Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGT 70230 || || || |||||||||||||| ||| || | ||||| | ||| |||| || || Sbjct 253336 GTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAGC 253277 Query 70231 TTATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTA 70290 | ||||| | | || ||||| || | ||||| || || || | | Sbjct 253276 TCGTCCTTGTTGTCCTGCACGATATCGTACACCTCCTGGGAGATCATGGGCGAGTGGATT 253217 Query 70291 CCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGttttttt 70350 ||||| || || || || || | ||| | || || || | ||| | || | Sbjct 253216 CCATTCTTGGGGTTCACGTAATGGAAAAGTTCGCTTATCACCTGCGAAAACTGCTTGGTG 253157 Query 70351 GTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 |||| ||||| | |||||| ||||| ||||| || || | | | || ||||||||||| Sbjct 253156 GTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCAGGATG 253098 >seq10 Length=558261 Score = 95.1 bits (104), Expect = 2e-14 Identities = 323/498 (65%), Gaps = 14/498 (3%) Strand=Plus/Plus Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTC 69603 ||||||||| ||||| ||| | | || ||||| ||| |||| || |||||| Sbjct 194952 AATCCAGGAACTTCATCTGGCGAAAATAAAGACCAAGAGGCATTGTCCTGGACACGTTTC 195011 Query 69604 ATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTT 69663 || || | ||| |||||||| || || || ||||| | | || ||| || || Sbjct 195012 ATGAAGATATCTGGAATCCATAGGGCGCAGAATAGATCGCGCGCCCTTAATTCCTCTTTG 195071 Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723 || ||||| ||| | | || || | || || ||||||||||| |||| || Sbjct 195072 CCATGGTTTTTGCGAAGTTGTAAGAAATCGAAAACGTCCGAATGCCATGGCTCTAAGTAG 195131 Query 69724 ATCGCCATGA-CTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATT 69782 || || | | | || || ||||||||||| ||||| || | ||||| ||||| || || Sbjct 195132 AT-GCAAAAAGCACCTGGGCGTTTATTTCCACCCTGGTCAACATATCTTGCAGTATTGTT 195190 Query 69783 ATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACT 69842 | || |||| |||||| | || ||||| || | || || | || || || ||| Sbjct 195191 GAAAACCCTCAACATCGGTACAAGTCCATTTGACGTCCCGTTGGACCCTGATATGTAAGA 195250 Query 69843 TCCTCTTGCGCGAATATTACTAATAGAT--AGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || || | | ||||| ||| || | || |||||||| || ||| ||||| Sbjct 195251 GCCCGTTCCTCTGATATT--CGATACATGAATCCCAATTCCTCCAGCGCCTTTCGAGATC 195308 Query 69901 AGAGCACAACGTTT----CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTT 69956 | |||| |||| | ||| ||| ||||| || || ||| || |||||| Sbjct 195309 ATAGCA----GTTTTATGAAGCGTGCGATAAATACCATCGATTGAATCCTCCATCATGCC 195364 Query 69957 AAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGA 70016 | ||||||||| |||| | || | | || || || ||||| | || || || Sbjct 195365 CACTAGAAAACAGGATGACAGGTACTGGTTCACCGTACCAGCGTTAAAAAGGGTCGGTGA 195424 Query 70017 TGCGTGAGTGAACCATTT 70034 ||| ||| |||| |||| Sbjct 195425 TGCATGAATGAAGTATTT 195442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908593927360