Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 194 1e-44 seq9 120 2e-22 >seq6 Length=784318 Score = 194 bits (214), Expect = 1e-44 Identities = 593/900 (66%), Gaps = 25/900 (3%) Strand=Plus/Minus Query 43675 TTTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATG 43734 |||||| |||||||| || || || |||| || || | || ||||| || || Sbjct 311520 TTTGCTGGCAGAAAATAAACGCAGATTCGTTCTGTTCCCCATCAAGTACCATGAAATCTG 311461 Query 43735 GCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAA 43794 |||| || ||| || ||||||| |||||||| || || ||| | ||| | | || Sbjct 311460 GCAAGCCTATAAACGCGCCGAGGCGTCGTTTTGGACCGCGGAGGAAATCGATCTATCCAA 311401 Query 43795 AGACTTAGCAC-ATTGGA----TTGCATTAAAACCACAA-GAAAAACATTTTATATCTTT 43848 || || ||| |||||| | |||| || | | || ||| |||| |||| Sbjct 311400 GGATATA-CACGATTGGAACAATCGCATGAA--CGAAAATGAACGTTATTTCCTATCGCG 311344 Query 43849 GGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT---AGTCG 43905 ||| | ||||||||||| || || ||||||||||| |||||| |||| | | Sbjct 311343 GGTGCTAGCGTTTTTTGCAGCATCGGATGGGATAGTCAACGAAAATCTGGTGGAAAATTT 311284 Query 43906 GTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCAT 43965 | ||| ||||| ||| || ||||| ||||||||| || |||||||| || Sbjct 311283 CTCTGCT---GAAGTGCAAAGTCCGGAAGCCAAATGTTTTTACGGATTTCAAATCATGAT 311227 Query 43966 AGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCA 44025 ||||| ||||| || || | ||| || ||||| ||||| |||||||| || | Sbjct 311226 GGAAAACATTCACTCCGAGACTTACTCGCTACTGATTGATACCTACATCAAGGACCCCAA 311167 Query 44026 CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGA 44085 || | | ||||| ||||| || ||||| | || || ||| | || || | Sbjct 311166 AGAAAGTGAGTTTTTGTTCAATGCAATCGAAACTATCCCGCAAATCAAAGAAAAGGCTCA 311107 Query 44086 CTGGGCCCTTAAATGGATA-AATTCAAATGATT-CTTTT-GGAGAACGACTTGTCGCGTT 44142 |||||| | | ||||| || | || | ||||| || ||| || | || || || Sbjct 311106 ATGGGCCATAAGGTGGATTCAAGACGAAGAAGCACTTTTCGGTGAAAGATTGGTGGCTTT 311047 Query 44143 TGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAA 44202 ||||| ||| ||||| |||| || ||||| || ||||| ||||| || ||| | || || Sbjct 311046 TGCAGCTGTTGAAGGTGTTTTTTTCTCAGGTTCTTTTGCAGCCATTTTCTGGCTCAAAAA 310987 Query 44203 ACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTT 44262 |||||||||||| || ||||| ||||| |||||| | || | | |||||||| || Sbjct 310986 GAAAGGTTTGATGCCGGGTTTGACATTTTCCAATGAGCTCATTTGCAGAGATGAAGGTTT 310927 Query 44263 ACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAA 44322 |||| |||||||| || ||| | ||| | | || | | | ||||||| || || Sbjct 310926 ACATACGGATTTTGCGTGTTTGCTGTTTGCACA-CTTGAAAA--ATAAGCC-AAATCCAA 310871 Query 44323 GA--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACA 44380 | | | | ||| || || |||||| || | || || || | | | | | Sbjct 310870 AAATCGTTGAAAGA-ATCATTACAGAGGCGGTTGAAATTGAGCAGCGTTATTTTAGAGAT 310812 Query 44381 GCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATAC 44440 || | || ||| || | || ||||| | ||||||||| |||||| | |||| Sbjct 310811 GCCCTGCCCGTATCATTGCTGGGCATGAACGCCGATTTGATGAATCAATATGTGGAATTT 310752 Query 44441 ATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCG 44500 |||| ||| | || | ||| ||||| || || |||| ||| || || Sbjct 310751 GTTGCTGATAGATTGTTGGTGGCTTTGGGTAATGACAAGTTTTATAAGGTATCCAATCCT 310692 Query 44501 TTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560 |||||||| |||||||| |||||| | | || || || || ||||| |||||| | ||| Sbjct 310691 TTTGATTTCATGGAAAACATTTCGCTAGCTGGTAAGACCAATTTTTTCGAAAAAAGAGTT 310632 >seq9 Length=718525 Score = 120 bits (132), Expect = 2e-22 Identities = 315/474 (66%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| || ||| | || || || ||| ||| ||||| | ||||||||| || | | Sbjct 267943 GGACTGTTACTTCACGGACCTCCAGGTACTGGTAAAACGCTGATTGCGAGAAAAATCGGA 267884 Query 19408 AAATTACTTACAAAACAACCTC-CCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAAT 19465 | | || ||| ||| ||||| || || ||||| |||||||| | | |||| Sbjct 267883 ACTATGCT--CAATGCAAGAGAGCCAAAGATCGTCAATGGGCCTGAAATTCTTAGCAAAT 267826 Query 19466 ATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA 19525 |||| || |||||||| ||| | || ||||||| || ||||||| ||| | | Sbjct 267825 ATGTGGGGTCCTCGGAAGAGAATATCCGTAATTTGTTTAAAGATGCTGAAGCCGAATACA 267766 Query 19526 AACGTTTAGGGCGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAAT 19583 || | | || | | ||| || |||| || || || | ||||| ||||| | | Sbjct 267765 AA-GCCAAAGGTG-AGGAGTCGTCGCTGCATATCATTATTTTTGATGAGCTGGACTCTGT 267708 Query 19584 CTGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCA 19637 || ||||||||||| || || || || ||||| |||| |||||||| || Sbjct 267707 CTTCAAGCAAAGAGGATCTCGTGGTGATGGAACAGGAGTCGGCGACAACGTTGTCAACCA 267648 Query 19638 ACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGAC 19697 || ||| | || | ||||||||| | ||||| ||||| ||| | || ||||| ||||| Sbjct 267647 GCTGCTGGCCAAGATGGACGGTGTTGATCAACTAAATAACATTCTCGTCATTGGTATGAC 267588 Query 19698 TAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGAT 19757 ||| | | || | || ||| || ||| | || || || || || ||| || || | Sbjct 267587 GAATCGTCGCGATCTGATTGACTCGGCATTACTGCGTCCTGGGCGTTTTGAAGTACAGGT 267528 Query 19758 CGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATAC 19811 ||| ||| | || || || || ||| | || |||||||| | || || || Sbjct 267527 CGAGATTCAATTGCCGGACGAGCAAGGAAGACTGCAAATTTTAGAAATTCAGAC 267474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455883744120