Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 206 3e-48 >seq1 Length=1828985 Score = 206 bits (228), Expect = 3e-48 Identities = 826/1287 (64%), Gaps = 39/1287 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | || || || || ||||| || |||||||| || ||||| | |||||| Sbjct 254777 GTACATGTTCGAGGTATAAGGCTCGAAGCACTCGTTATTACCTAAAATTTGAGAGGTGGA 254718 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| ||||||||||| || | | |||| ||| | | ||| || |||| | | Sbjct 254717 GGCAGTTGGCATTGGAGCAACGAGAAGAGAGTTTCTCAAACCGC-CTTTTTGAATCTTCG 254659 Query 110827 CTTGAGAAC-ATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 ||| || |||||| || ||| | | |||| ||| |||| |||| |||||||| Sbjct 254658 CTTTCAAAGTATCCCACTCCCATAGGTCCG-TTGGCTTCTTGTTCC-ACATATCAAACTG 254601 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA-- 110941 | | |||||||| || ||||||||||| |||| || || ||||||| |||| Sbjct 254600 TAAAATACCTTGGGAGGCAGGAGAACCCTCGAAGGATTGGTATGAACCTT--CTTTCAAG 254543 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | ||| | || |||| | || || || || ||||| || || || || Sbjct 254542 GCTAGTTCGTGGGATGCTTCCAAAGCGGCATGGTAGATAGTTTCGAAAATTTGAATGTTG 254483 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | ||||| || || | || ||||||| | || | | || || |||| || | | Sbjct 254482 AGTTCCTTAGCCTCTTGGGAGTCAAATGGGATACGCAAAACCATGAAAGCATCTGCCAAA 254423 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 || || ||||| | | |||||||| |||| |||||| || || | ||||| || || Sbjct 254422 CCCTGTACACCAAGTGCGATAGGTCTATGTCTCATATTGGAGTTCCTGGCAGTTTCGACT 254363 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || | || | ||| |||| | || || || | ||||| | || | ||| || Sbjct 254362 GGGTAGTAGTTACGGTCGATGATCTGATTCAGGTTATACGTAACCACTTTGGCGATGTCG 254303 Query 111182 TGAAGTTTTTCATAAT--CAAAAGTGCGAGTCT---CTTC---------ATTGACATACT 111227 ||||| ||||| | | | | ||| |||| | || | ||| | Sbjct 254302 TGAAGCTTTTCGAAGTTGTACCACTGC--GTCTTGCCGTCCGCCGAAGTTTCGACGAAAG 254245 Query 111228 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 111287 || |||| || || |||||||| |||||||| || ||||| | | ||||| | Sbjct 254244 AAGGTAGGGAGACAGAAGCCAAATTACAAACAGCAGTTTCATCAGGCGCAGAATACTCGA 254185 Query 111288 AAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCT 111347 ||||| ||| ||||| ||| ||| || ||||||||||||||||| || Sbjct 254184 CGATTTCGCAACACAAGTTTGAAGACTTGATGACACCCAAATTCTTTTGGTTCGATTTAC 254125 Query 111348 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAA 111407 |||||| ||||| ||||| |||||| | || || || ||||| || || | | |||| Sbjct 254124 GGTTGCAGGCATCTTTGTACAGCATGAAAGGTGTACCAGTCTCTGTTTGGGCCTCTAGAA 254065 Query 111408 TAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCG 111463 |||| | ||| ||| | | | || | |||| | | | || || ||| || Sbjct 254064 TAGCATACCACAACTTTTGAGCCTTG----ATGGTCTTTCTACCACGACCTTCCTGAACG 254009 Query 111464 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 111523 || ||| || ||||||||||| | || |||| | || ||||| || | Sbjct 254008 TAGCGCTCGTAAAGAGCTTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCA 253949 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 |||| |||| |||| ||| | ||| ||||| |||| | ||| || | ||| ||| Sbjct 253948 CTTGGAGAGAACAGAGTCCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGA 253889 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 ||||| || | || || | |||||| ||| || || | ||| ||||| || Sbjct 253888 ATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATTTCCTCCTTACCGTGGTTTTTGCGG 253829 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 111702 | |||| || || | || || | |||||||||||||| || | || | || || Sbjct 253828 ATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCT 253769 Query 111703 ---CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 |||| | ||| |||||| || ||||| || ||| ||| || || |||| ||| Sbjct 253768 GGTCTTTTG-TTACCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCAT 253710 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 || |||| ||| | || || ||||| || ||| ||| | | | | Sbjct 253709 GGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAAT 253650 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | || || |||| || ||||| || || || ||||| ||||| || | | Sbjct 253649 GTTGTGAATATGCAATCCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAA 253590 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| | || || |||| ||||||||| || || | || | | ||||| ||||| Sbjct 253589 AGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACAT 253530 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAA 111966 ||| || || ||||| |||||||| Sbjct 253529 CTGTGGGTGGGGAGTACCGGCATTGAA 253503 Score = 86.0 bits (94), Expect = 8e-12 Identities = 215/321 (67%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG- 11598 || ||||||||||| | || ||||||| ||| || | ||| ||||||| | Sbjct 826201 AAACCATCCATCTCTACCAACAACTGATTAAGTGTGGCCTCACGCTCGTCATTTGATCCA 826142 Query 11599 --CATACCACCAGCACTGCGT--TGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACA 11653 ||| ||||| | | | | | ||| ||| | |||||||||||||| | || | Sbjct 826141 CCCATGGCACCACCTTTCCCTCTTTCTTTCCCGATGGCATCAATCTCATCGACAAAAATG 826082 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || | ||| ||| | |||| ||||||| |||||||| || | |||||| ||| Sbjct 826081 ATGGAAGGTGCCATTTTTCTGGCGTTTTCAAATAGATCGCGTACACGGGAGGCACCTACA 826022 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTC 11772 || |||||||| || ||||| | | |||| |||| | ||||| ||| | ||| Sbjct 826021 CCGACAAACATTTCGACAAATTCAGACCCAGA-TACTGACAAAAATGGAACACCAGCTTC 825963 Query 11773 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGC 11832 ||| || | || || || | |||||||| |||||||| || | ||||| || Sbjct 825962 ACCAGCCGTAGCCTTAGCAAGTAAAGTCTTTCCGGTACCTGGTGGGCCAGAGAGAATAGC 825903 Query 11833 GCCTCGGGGGATCTTGGCACC 11853 || |||||||| ||||| || Sbjct 825902 ACCGCGGGGGATTTTGGCTCC 825882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031811590400