Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 264 1e-65 >seq1 Length=1828985 Score = 264 bits (292), Expect = 1e-65 Identities = 1124/1748 (64%), Gaps = 37/1748 (2%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| | || | ||||| ||||| ||||||||||||| | |||| | Sbjct 253380 GAAAGACCACAACATTTGATTATGCGTGTGGCTGTCGGTATTCATGGCAACAACATCGCC 253439 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 || ||||| || ||| | |||||| | | ||| |||| || || | || || Sbjct 253440 AGGGTATTGGAAACTTACAATCTGATGTCACTCAAGTAC-TTCACGCATGCGTCTCCTAC 253498 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 | |||||||| ||||| || || || ||||| ||||| | | || | || Sbjct 253499 GTTGTTCAATGCCGGTACTCCCCACCCACAGATGTCGTCGTGCTTTTTGGTGGCTATGAA 253558 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 || ||||||||| |||| || || | ||| | | || ||||| ||||| || Sbjct 253559 AGACGACTCAATCGACGGCATTTACGACACTTTGAAAGAATGTGCTATGATCTCTAAAAC 253618 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 || || ||||| || |||| || || | | | | | ||| ||| || Sbjct 253619 TGCGGGCGGTATCGGATTGCATATTCACAACATTCGCTCGACCGGGTCTTACATTGCCGG 253678 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 ||||| || || | ||| |||| || ||| |||| || || ||| ||| || || Sbjct 253679 TACAAACGGAACTTCCAACGGTCTTATCCCCATGATTCGTGTCTTCAACAACACTGCTCG 253738 Query 104575 CTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCAT 104630 ||| || |||||| ||| | |||| || || | || | || |||||||||| Sbjct 253739 CTACGTTGATCAAGGTGGTAA-CAAAAGACCAGGTGCTTTTGCTCTGTACCTTGAGCCAT 253797 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 |||| | || || | || || |||| | || ||||| ||| | ||||| | Sbjct 253798 GGCATTCAGACATTTTCGATTTTGTTGACATCCGCAAAAACCACGGTAAGGAGGAAATTC 253857 Query 104691 GGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 | |||| | ||| | ||| | ||||| |||||||| || | || ||| | || || || Sbjct 253858 G-TGCCAGAGATTTGTTCCCAGCTCTTTGGATTCCTGACTTGTTTATGCAAAGGGTCCAG 253916 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 || | |||| ||||| |||| || | |||| | || || || || | || | Sbjct 253917 GAAAATGGCGATTGGACTCTGTTCTCTCCAAGTGAAGCTCCAGGACTTGCTGACGTTTAT 253976 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 || | ||||||||||| |||||| |||| | |||||||| | | ||| Sbjct 253977 GGAGCAGAGTTTGAAGCTCTTTACGAGCGCTACGTTCAGGAAGGTCGTGGTAGAAAGACC 254036 Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | ||| | ||||| | |||||||| || | ||||| |||||||||||||| Sbjct 254037 ATCAAGGCTCAAAAGTTGTGGTATGCTATTCTAGAGGCCCAAACAGAGACTGGTACACCT 254096 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| |||||||| ||||| |||| || || ||||||||||||||||| ||| Sbjct 254097 TTCATGCTGTACAAAGATGCCTGCAACCGTAAATCGAACCAAAAGAATTTGGGTGTCATC 254156 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||| ||| || | ||| |||||| | || | | | | ||||| || ||||| Sbjct 254157 AAGTCTTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTGCGCCTGATGAAACTGCTGTT 254216 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA----TC--CAGA-GACAA-AGA 105101 ||||| | || || || | || || | || || || | || | ||| | Sbjct 254217 TGTAATTTGGCTTCTGTCTCCCTACCTTCTTTCGTCGAAACTTCGGCGGACGGCAAGACG 254276 Query 105102 CATTTG----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCT-AAA 105156 || | | | | ||||| || ||||| | | ||| || || | ||||| || Sbjct 254277 CAGTGGTACAACTTCGAAAAGCTTCACGACATCGCCAAAGTGGTTACGTATAACCTGAAT 254336 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 |||| | || || | || | ||||| || || ||||| | || || ||||||||||| Sbjct 254337 CAGA-TCATCGACCGTAACTACTACCCAGTCGAAACTGCCAGGAACTCCAATATGAGACA 254395 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 | || || | || ||||| |||||| | || |||| ||||| ||| || | | Sbjct 254396 TAGACCTATCGCACTTGGTGTACAGGGTTTGGCAGATGCTTTCATGGTTTTGCGTATCCC 254455 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 |||||| ||| | || || |||||| |||| | || || || || || || || || Sbjct 254456 ATTTGACTCCCAAGAGGCTAAGGAACTCAACATTCAAATTTTCGAAACTATCTACCATGC 254515 Query 105337 CGCTCTTGAGGCGAGTTCA-GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 |||| | || || | || || | || | || ||| |||| || |||| |||| Sbjct 254516 CGCTTTGGAAGC-ATCCCACGAACTAGCCTTGAAAGAAGGTTCATACCAATCCTTCGAGG 254574 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTT 105454 ||||||| || || ||||| | | || |||||||||| |||| || |||| | Sbjct 254575 GTTCTCCTGCCTCCCAAGGTATTTTACAGTTTGATATGT-GGAACAAGAAGCCAACGGAC 254633 Query 105455 CACTACGACTGGGAAGCTCT-CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 | | || ||||| || | ||| | | |||| || ||| | | ||| ||| Sbjct 254634 CTATGGGAGTGGGATACTTTGAAAGCGAAGATTCAAAAAG-GCGGTTTGAGAAACTCTCT 254692 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 ||| | |||||||||||||| ||||||||| | ||||| || |||||||| || ||||| Sbjct 254693 TCTCGTTGCTCCAATGCCAACTGCCTCCACCTCTCAAATTTTAGGTAATAACGAGTGCTT 254752 Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 || || || || ||||||| || | | | | | |||| || || || || Sbjct 254753 CGAGCCTTATACCTCGAACATGTACTCGCGTCGTGTCTTATCGGGTGAATTCCAAATCGT 254812 Query 105634 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 105693 |||| | || || ||||| || ||||| ||||| | | | ||||||| Sbjct 254813 CAACCCCTACCTACTGCGCGACCTGGTCGATCTTGGTATCTGGGACGATGCTATGAAG-- 254870 Query 105694 TCTCATGGTGAAAGCGGGT---GGTTCCATTCAAAATATTGTGGATATTCCA-AATGAAA 105749 |||||| | | | | | ||||| ||||| || | | | |||||| || | Sbjct 254871 TCTCAT-ATCATTTCTGATAACGGTTCTATTCAGAACCTACCGAACATTCCACAAAGCTT 254929 Query 105750 TTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCG 105809 |||| || ||| || ||||||||| | ||| | ||||||| ||||| | Sbjct 254930 GAAAGATCTT-TACAAGACCGTTTGGGAATTGTCTCAGAAAGCCATCATTGAGATGGCAG 254988 Query 105810 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAA 105869 | ||||||| | ||| |||||| || |||| | || || ||| || | Sbjct 254989 CCGATCGTGCTTGCTACATTGACCAGTCTCAATCCTTAAACGTCCACATCCGTGCCCCTA 255048 Query 105870 CGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGA 105929 | ||| ||||| || |||||| | ||| |||||||||||||| | || ||||| | Sbjct 255049 CCATGGGTAAGCTAACTAGTATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACGGGTA 255108 Query 105930 TGTATTAC 105937 |||| ||| Sbjct 255109 TGTACTAC 255116 Score = 82.4 bits (90), Expect = 9e-11 Identities = 212/320 (66%), Gaps = 6/320 (2%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG- 9672 ||||||||||||||| ||| | || |||| || || || || ||||| | | Sbjct 826201 AAACCATCCATCTCTACCAACAACTGATTAAGTGTGGCCTCACGCTCGTCATTTGATCCA 826142 Query 9673 --CATACCACCAGCACTGCGT--TGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACG 9727 ||| ||||| | | | | | ||||||| | ||||||||||||||| | || | | Sbjct 826141 CCCATGGCACCACCTTTCCCTCTTTCTTTCCCGATGGCATCAATCTCATCGACAAAAATG 826082 Query 9728 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 9787 ||| | ||| ||| | ||| |||||| ||||| |||||||| ||| || ||| Sbjct 826081 ATGGAAGGTGCCATTTTTCTGGCGTTTTCAAATAGATCGCGTACACGGGAGGCACCTACA 826022 Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9847 || |||||||| || ||||| | | | || | | || || ||| || |||| Sbjct 826021 CCGACAAACATTTCGACAAATTCAGACCCAGATACTGACAAAAATGGAACACCAGCTTCA 825962 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 9907 || || | || || || | |||||| || |||||||| || | ||| | ||| Sbjct 825961 CCAGCCGTAGCCTTAGCAAGTAAAGTCTTTCCGGTACCTGGTGGGCCAGAGAGAATAGCA 825902 Query 9908 CCTCGTGGAATCTTGGCGCC 9927 || || || || ||||| || Sbjct 825901 CCGCGGGGGATTTTGGCTCC 825882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260625021760