Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 6e-32
>seq1
Length=1828985
Score = 152 bits (168), Expect = 6e-32
Identities = 343/513 (67%), Gaps = 2/513 (0%)
Strand=Plus/Minus
Query 79375 ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATC 79434
||| | | ||| || | ||| || ||||| || || | ||| | || | | ||| ||
Sbjct 253912 ACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATT 253853
Query 79435 TCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGC 79494
||||| | || ||||| || | || | ||| || | ||||| | ||||| |||
Sbjct 253852 TCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGC 253793
Query 79495 TCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCC 79554
|| || || | || || | ||| | ||| || || || | ||||| || ||
Sbjct 253792 TCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACGTAGCGAGCA 253733
Query 79555 GTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTG 79614
||||||||||| || || | |||||| | | |||| || ||||| || |||
Sbjct 253732 GTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCA 253673
Query 79615 ATTCGTGTACCGCTCGCCCGAATGTTC-GAGCAGTGGATTCCGATGCCCCCGGACCACTT 79673
|| | ||| ||| |||||||| || | || | |||||| || || | ||
Sbjct 253672 ATGTAAGACCCGGTCGAGCGAATGTTGTGAATA-TGCAATCCGATACCGCCCGCAGTTTT 253614
Query 79674 GGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCAT 79733
||||| || || || || | || ||||| ||||| ||||| |||||||| |||||
Sbjct 253613 AGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCAT 253554
Query 79734 AGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGG 79793
||| |||| ||||| |||||||||||||| | |||||||| ||||| | || ||
Sbjct 253553 AGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAACAACGTAGG 253494
Query 79794 CGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAG 79853
| ||| ||||||||| |||| | |||||||| ||| || ||| || | | ||
Sbjct 253493 AGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGAT 253434
Query 79854 GTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886
|| || ||| || || ||||| || || |||||
Sbjct 253433 GTTGTTGCCATGAATACCGACAGCCACACGCAT 253401
Score = 127 bits (140), Expect = 2e-24
Identities = 342/516 (66%), Gaps = 8/516 (2%)
Strand=Plus/Plus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || ||||| || |||||| || || || | | || || || ||| |
Sbjct 253401 ATGCGTGTGGCTGTCGGTATTCATGGCAACAACATCGCCAGGGTATTGGAAACTTACAAT 253460
Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237
|||||| | |||| ||||||||| ||| | || || | ||||| |||||||| |
Sbjct 253461 CTGATGTCACTCAAGTACTTCACGCATGCGTCTCCTACGTTGTTCAATGCCGGTACTCCC 253520
Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297
|||| ||||||||| || || | ||||||||||| || ||| || || |||||
Sbjct 253521 CACCCACAGATGTCGTCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATT 253580
Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357
||||| || | || || || || ||||| || | || |||||||| | ||
Sbjct 253581 TACGACACTTTGAAAGAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCA- 253639
Query 19358 TGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416
| || || || || |||| || | || || || |||||| || ||||
Sbjct 253640 TATTCACAACATTCGCTCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGG 253699
Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476
| | |||| ||| | || |||||||||||||| || | ||||| | || || ||
Sbjct 253700 TCTTATCCCCATGATTCGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAA 253759
Query 19477 CAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534
|||| | || | ||| || || | ||||| ||||||||||| | ||| | | |||
Sbjct 253760 CAAAAGACCAGGTGCT--TTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGAT 253817
Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC-GCGACCTCTTCAC 19593
|| | || | ||| ||||| ||| | ||||| || || || | | || | ||| |
Sbjct 253818 TTTGTTGACATCCGCAAAAACCACGGTAAGGAGGAAATTCG-TGCCAGAGATTTGTTCCC 253876
Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGT 19629
|| | |||||||| ||| | || ||| | | |||
Sbjct 253877 AGCTCTTTGGATTCCTGACTTGTTTATGCAAAGGGT 253912
Score = 86.0 bits (94), Expect = 7e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| ||| |||||||| |||||||| | |||||||||||| ||||| | ||||||||
Sbjct 255124 GTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTA 255065
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| ||||| ||| | ||| ||| || ||| | || || |||||||| |||
Sbjct 255064 GTTAGCTTACCCATGGTAGGGGCACGGATGTGGACGTTTAAGGATTGAGACTGGTCAATG 255005
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| | | || ||||| ||||| || |||| | || || | | ||||| | ||||
Sbjct 255004 TAGCAAGCACGATCGGCTGCCATCTCAATGATGGCTTTCTGAGACAATTCCCAAACGGTC 254945
Query 78370 CGGTAAA 78376
|||||
Sbjct 254944 TTGTAAA 254938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524635442560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |