Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-32 >seq1 Length=1828985 Score = 152 bits (168), Expect = 6e-32 Identities = 343/513 (67%), Gaps = 2/513 (0%) Strand=Plus/Minus Query 79375 ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATC 79434 ||| | | ||| || | ||| || ||||| || || | ||| | || | | ||| || Sbjct 253912 ACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCACGAATT 253853 Query 79435 TCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGC 79494 ||||| | || ||||| || | || | ||| || | ||||| | ||||| ||| Sbjct 253852 TCCTCCTTACCGTGGTTTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGC 253793 Query 79495 TCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCC 79554 || || || | || || | ||| | ||| || || || | ||||| || || Sbjct 253792 TCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCACCTTGATCAACGTAGCGAGCA 253733 Query 79555 GTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTG 79614 ||||||||||| || || | |||||| | | |||| || ||||| || ||| Sbjct 253732 GTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCA 253673 Query 79615 ATTCGTGTACCGCTCGCCCGAATGTTC-GAGCAGTGGATTCCGATGCCCCCGGACCACTT 79673 || | ||| ||| |||||||| || | || | |||||| || || | || Sbjct 253672 ATGTAAGACCCGGTCGAGCGAATGTTGTGAATA-TGCAATCCGATACCGCCCGCAGTTTT 253614 Query 79674 GGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCAT 79733 ||||| || || || || | || ||||| ||||| ||||| |||||||| ||||| Sbjct 253613 AGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCAT 253554 Query 79734 AGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGG 79793 ||| |||| ||||| |||||||||||||| | |||||||| ||||| | || || Sbjct 253553 AGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTACCGGCATTGAACAACGTAGG 253494 Query 79794 CGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAG 79853 | ||| ||||||||| |||| | |||||||| ||| || ||| || | | || Sbjct 253493 AGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGAT 253434 Query 79854 GTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 || || ||| || || ||||| || || ||||| Sbjct 253433 GTTGTTGCCATGAATACCGACAGCCACACGCAT 253401 Score = 127 bits (140), Expect = 2e-24 Identities = 342/516 (66%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || ||||| || |||||| || || || | | || || || ||| | Sbjct 253401 ATGCGTGTGGCTGTCGGTATTCATGGCAACAACATCGCCAGGGTATTGGAAACTTACAAT 253460 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 |||||| | |||| ||||||||| ||| | || || | ||||| |||||||| | Sbjct 253461 CTGATGTCACTCAAGTACTTCACGCATGCGTCTCCTACGTTGTTCAATGCCGGTACTCCC 253520 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 |||| ||||||||| || || | ||||||||||| || ||| || || ||||| Sbjct 253521 CACCCACAGATGTCGTCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATT 253580 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 ||||| || | || || || || ||||| || | || |||||||| | || Sbjct 253581 TACGACACTTTGAAAGAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCA- 253639 Query 19358 TGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | || || || || |||| || | || || || |||||| || |||| Sbjct 253640 TATTCACAACATTCGCTCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGG 253699 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 | | |||| ||| | || |||||||||||||| || | ||||| | || || || Sbjct 253700 TCTTATCCCCATGATTCGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAA 253759 Query 19477 CAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 |||| | || | ||| || || | ||||| ||||||||||| | ||| | | ||| Sbjct 253760 CAAAAGACCAGGTGCT--TTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGAT 253817 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC-GCGACCTCTTCAC 19593 || | || | ||| ||||| ||| | ||||| || || || | | || | ||| | Sbjct 253818 TTTGTTGACATCCGCAAAAACCACGGTAAGGAGGAAATTCG-TGCCAGAGATTTGTTCCC 253876 Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGT 19629 || | |||||||| ||| | || ||| | | ||| Sbjct 253877 AGCTCTTTGGATTCCTGACTTGTTTATGCAAAGGGT 253912 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 |||| ||| |||||||| |||||||| | |||||||||||| ||||| | |||||||| Sbjct 255124 GTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATACTA 255065 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | ||||| ||| | ||| ||| || ||| | || || |||||||| ||| Sbjct 255064 GTTAGCTTACCCATGGTAGGGGCACGGATGTGGACGTTTAAGGATTGAGACTGGTCAATG 255005 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 || | | || ||||| ||||| || |||| | || || | | ||||| | |||| Sbjct 255004 TAGCAAGCACGATCGGCTGCCATCTCAATGATGGCTTTCTGAGACAATTCCCAAACGGTC 254945 Query 78370 CGGTAAA 78376 ||||| Sbjct 254944 TTGTAAA 254938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524635442560