Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
seq4 89.7 6e-13
>seq1
Length=1828985
Score = 141 bits (156), Expect = 1e-28
Identities = 302/443 (68%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| ||||| || | || || ||||||| || ||||| ||||| ||||||
Sbjct 253473 AAGTACTTCACGCATGCGTCTCCTACGTTGTTCAATGCCGGTACTCCCCACCCACAGATG 253532
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
||| ||||| ||||||| ||||| || ||||| ||||||||||| ||||| || |
Sbjct 253533 TCGTCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATTTACGACACTTTG 253592
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTC-GAACGT 53445
|| || ||||| ||||| || |||| |||||||| | || | || ||| |
Sbjct 253593 AAAGAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCA-TATTCACAACAT 253651
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
|| ||| ||| | || || || ||||| || | || | | || ||
Sbjct 253652 TCGCTCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGGTCTTATCCCCAT 253711
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
| | || |||||||||||||| || || ||||| | || |||||| || | | |||
Sbjct 253712 GATTCGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAACAAAAGACCAGG 253771
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || || | ||||| ||||| ||||| | |||||| | || ||| | || | |
Sbjct 253772 TG-CTTTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGATTTTGTTGACATCC 253830
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCC-GTGACCTGTTTACAGCTCTGTGGATT 53683
| || || ||| | || || || || |||| | || |||| ||||||| ||||||
Sbjct 253831 GCAAAAACCACGGTAAGGAGGAAATTCG-TGCCAGAGATTTGTTCCCAGCTCTTTGGATT 253889
Query 53684 CCGGACCTCTTCATGCAAAAGGT 53706
|| ||| | || ||||||| |||
Sbjct 253890 CCTGACTTGTTTATGCAAAGGGT 253912
>seq4
Length=937132
Score = 89.7 bits (98), Expect = 6e-13
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAG-AGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363
|| ||||||||||||| ||| || | ||| || ||||||| | | ||||| |||
Sbjct 692019 GTAAAAATGTAACGAGGAGCC-GCTGAATCTTTACCACCAGTAGCTCTAGTACCAAATGC 691961
Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423
||| |||||| ||| |||| | |||||| | ||||||||||| |||||||| ||
Sbjct 691960 ACCATTCGGCTTCAAAAGGTAGATGTTGTTCGAGCCCACAAAGTCTTGAGCCATCCCAAC 691901
Query 117424 AATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAG 117481
||| || || | || | ||||||||| ||||| || ||||| | |||||
Sbjct 691900 AATGGT--CTGAGCTAGTGACATCTCACCATGATGATAATTGGTGTGCTCAGAAACGTAA 691843
Query 117482 CCCGCCAGCTGAGCCACCTTCATGTC 117507
|| ||||||||| ||||| || ||
Sbjct 691842 CCGATCAGCTGAGCAACCTTGATCTC 691817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215835835200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |