Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 seq4 89.7 6e-13 >seq1 Length=1828985 Score = 141 bits (156), Expect = 1e-28 Identities = 302/443 (68%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| ||||| || | || || ||||||| || ||||| ||||| |||||| Sbjct 253473 AAGTACTTCACGCATGCGTCTCCTACGTTGTTCAATGCCGGTACTCCCCACCCACAGATG 253532 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 ||| ||||| ||||||| ||||| || ||||| ||||||||||| ||||| || | Sbjct 253533 TCGTCGTGCTTTTTGGTGGCTATGAAAGACGACTCAATCGACGGCATTTACGACACTTTG 253592 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTC-GAACGT 53445 || || ||||| ||||| || |||| |||||||| | || | || ||| | Sbjct 253593 AAAGAATGTGCTATGATCTCTAAAACTGCGGGCGGTATCGGATTGCA-TATTCACAACAT 253651 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 || ||| ||| | || || || ||||| || | || | | || || Sbjct 253652 TCGCTCGACCGGGTCTTACATTGCCGGTACAAACGGAACTTCCAACGGTCTTATCCCCAT 253711 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564 | | || |||||||||||||| || || ||||| | || |||||| || | | ||| Sbjct 253712 GATTCGTGTCTTCAACAACACTGCTCGCTACGTTGATCAAGGTGGTAACAAAAGACCAGG 253771 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | || || | ||||| ||||| ||||| | |||||| | || ||| | || | | Sbjct 253772 TG-CTTTTGCTCTGTACCTTGAGCCATGGCATTCAGACATTTTCGATTTTGTTGACATCC 253830 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCC-GTGACCTGTTTACAGCTCTGTGGATT 53683 | || || ||| | || || || || |||| | || |||| ||||||| |||||| Sbjct 253831 GCAAAAACCACGGTAAGGAGGAAATTCG-TGCCAGAGATTTGTTCCCAGCTCTTTGGATT 253889 Query 53684 CCGGACCTCTTCATGCAAAAGGT 53706 || ||| | || ||||||| ||| Sbjct 253890 CCTGACTTGTTTATGCAAAGGGT 253912 >seq4 Length=937132 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAG-AGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 || ||||||||||||| ||| || | ||| || ||||||| | | ||||| ||| Sbjct 692019 GTAAAAATGTAACGAGGAGCC-GCTGAATCTTTACCACCAGTAGCTCTAGTACCAAATGC 691961 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 ||| |||||| ||| |||| | |||||| | ||||||||||| |||||||| || Sbjct 691960 ACCATTCGGCTTCAAAAGGTAGATGTTGTTCGAGCCCACAAAGTCTTGAGCCATCCCAAC 691901 Query 117424 AATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAG 117481 ||| || || | || | ||||||||| ||||| || ||||| | ||||| Sbjct 691900 AATGGT--CTGAGCTAGTGACATCTCACCATGATGATAATTGGTGTGCTCAGAAACGTAA 691843 Query 117482 CCCGCCAGCTGAGCCACCTTCATGTC 117507 || ||||||||| ||||| || || Sbjct 691842 CCGATCAGCTGAGCAACCTTGATCTC 691817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215835835200