Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-26
seq9 125 8e-24
seq1 123 3e-23
seq10 82.4 9e-11
>seq3
Length=955168
Score = 134 bits (148), Expect = 2e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||| ||||| || || |||||||| ||||| |
Sbjct 273937 ATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCT 273878
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || |||||||||||||| || |||||||| |||||
Sbjct 273877 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 273818
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || |||||||||||||| | || || | | || | | ||||| ||
Sbjct 273817 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 273758
Query 27586 GTCCAAAAGGAATCCAC 27602
|||| |||||||||||
Sbjct 273757 ATCCAGAAGGAATCCAC 273741
>seq9
Length=718525
Score = 125 bits (138), Expect = 8e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || || | ||||
Sbjct 427480 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCATT 427421
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| ||||||||||| |||||||| ||||||||| | |
Sbjct 427420 GACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATTG 427361
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||||||||| || || || | | ||| | | ||||| || |||| |||
Sbjct 427360 ATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAAG 427301
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || | ||||||
Sbjct 427300 GAATCCACTTTGCACTTGGTCTTG 427277
>seq1
Length=1828985
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || | ||||| ||||| |||||||| || || ||||| |
Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||| || |||||||| |||||||| ||||| |||||||||
Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| || || ||| | || |||| | || | | ||||| ||
Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||| ||
Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCA 1304784
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| ||||| | || || ||||| |||||||| || || || ||
Sbjct 1304353 AATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCTTC 1304412
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| || ||||| || ||||| |||||||| || ||||| ||||||||
Sbjct 1304413 GGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 1304472
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| | | |||||||| || || ||| | || |||| | || | | ||||| ||
Sbjct 1304473 GCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAA 1304532
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||||| ||||| || | || | | || ||||||||
Sbjct 1304533 TATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGG 1304580
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || | ||||| ||||| || ||||| ||||| || || |
Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||| || ||||| ||||||||||| ||||| |||||||||
Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| || || ||| | || |||| | || | | ||||| |||
Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||| ||||| ||
Sbjct 1304990 ATACAAAAGGAATCGACTCTCCA 1305012
Score = 100 bits (110), Expect = 3e-16
Identities = 333/507 (66%), Gaps = 17/507 (3%)
Strand=Plus/Minus
Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301
|||||| ||||| || || | ||||| || | |||| || ||||| | ||| ||||
Sbjct 253895 GTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCA-CGAATTTCCTCCTTACCGTGGT 253837
Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361
| ||| | || | ||| || | ||||| | |||||||||||| || |||| || |
Sbjct 253836 TTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAA 253777
Query 81362 TCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417
| || ||| | ||||| || | ||||| || ||||| ||| || |||
Sbjct 253776 AAGCACCTGGTCTTTTGTTA-CCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACA 253718
Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477
|| | ||| ||||| | ||| | || ||||| ||||| | || ||||| |
Sbjct 253717 CGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTC 253658
Query 81478 GCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCA 81534
| ||| | ||| || || || ||||| || || | || ||| || ||| ||||
Sbjct 253657 GAGCGAATGTTGTGAATATGCAAT-CCGATACCGCCCG--CAGTTTTAGAGATCATAGCA 253601
Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594
|| |||| || || ||||| || ||||| || | |||||| | | ||| ||
Sbjct 253600 CATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAAG 253541
Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652
|| |||||||| ||| | ||| ||||||||||||| || || | ||| ||
Sbjct 253540 CACGACGACATCTGTGGG--TGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCG 253483
Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGT 81712
|||| || | ||||||||| | || |||||| || | | || | || || |
Sbjct 253482 TGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGATGTTGTTGCCAT 253423
Query 81713 GAATACCGATAGCTACACGCATAAACA 81739
||||||||| ||| |||||||||| ||
Sbjct 253422 GAATACCGACAGCCACACGCATAATCA 253396
>seq10
Length=558261
Score = 82.4 bits (90), Expect = 9e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 80955 GATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014
|||||| ||||||||| || || |||||||| ||||||||||| || |||||||| |
Sbjct 194732 GATTTCACAGCACAAATTGGATGATTTAATTGTCCCCAGGTTTTTTTGATTTGACTTTGT 194791
Query 81015 GTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||||| | ||| |||||| |||| | || ||| ||||| || ||
Sbjct 194792 ATTGCACGAGTCTTTGTAGAGCATGAAAGGACCACCAGTCTCAACTTG 194839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310228906880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |