Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 seq9 125 8e-24 seq1 123 3e-23 seq10 82.4 9e-11 >seq3 Length=955168 Score = 134 bits (148), Expect = 2e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||| ||||| || || |||||||| ||||| | Sbjct 273937 ATGCAAATTTTCGTCAAGACCCTAACCGGTAAGACGATCACCCTTGAGGTGGAGTCTTCT 273878 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || |||||||||||||| || |||||||| ||||| Sbjct 273877 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAA 273818 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||||||||| | || || | | || | | ||||| || Sbjct 273817 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 273758 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| ||||||||||| Sbjct 273757 ATCCAGAAGGAATCCAC 273741 >seq9 Length=718525 Score = 125 bits (138), Expect = 8e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | || || ||||| || ||| | || ||||| || || | |||| Sbjct 427480 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCATT 427421 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| ||||||||||| |||||||| ||||||||| | | Sbjct 427420 GACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATTG 427361 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||||||||| || || || | | ||| | | ||||| || |||| ||| Sbjct 427360 ATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAAG 427301 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | || | |||||| Sbjct 427300 GAATCCACTTTGCACTTGGTCTTG 427277 >seq1 Length=1828985 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || | ||||| ||||| |||||||| || || ||||| | Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || |||||||| |||||||| ||||| ||||||||| Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| || || ||| | || |||| | || | | ||||| || Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| ||||| || Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCA 1304784 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| | || || ||||| |||||||| || || || || Sbjct 1304353 AATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCTTC 1304412 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || ||||| || ||||| |||||||| || ||||| |||||||| Sbjct 1304413 GGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 1304472 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | |||||||| || || ||| | || |||| | || | | ||||| || Sbjct 1304473 GCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAA 1304532 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||| ||||| || | || | | || |||||||| Sbjct 1304533 TATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGG 1304580 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || | ||||| ||||| || ||||| ||||| || || | Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| || || ||| | || |||| | || | | ||||| ||| Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||||||||| ||||| || Sbjct 1304990 ATACAAAAGGAATCGACTCTCCA 1305012 Score = 100 bits (110), Expect = 3e-16 Identities = 333/507 (66%), Gaps = 17/507 (3%) Strand=Plus/Minus Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301 |||||| ||||| || || | ||||| || | |||| || ||||| | ||| |||| Sbjct 253895 GTCAGGAATCCAAAGAGCTGGGAACAAATCTCTGGCA-CGAATTTCCTCCTTACCGTGGT 253837 Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361 | ||| | || | ||| || | ||||| | |||||||||||| || |||| || | Sbjct 253836 TTTTGCGGATGTCAACAAAATCGAAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAA 253777 Query 81362 TCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | || ||| | ||||| || | ||||| || ||||| ||| || ||| Sbjct 253776 AAGCACCTGGTCTTTTGTTA-CCACCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACA 253718 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 || | ||| ||||| | ||| | || ||||| ||||| | || ||||| | Sbjct 253717 CGAATCATGGGGATAAGACCGTTGGAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTC 253658 Query 81478 GCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCA 81534 | ||| | ||| || || || ||||| || || | || ||| || ||| |||| Sbjct 253657 GAGCGAATGTTGTGAATATGCAAT-CCGATACCGCCCG--CAGTTTTAGAGATCATAGCA 253601 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || |||| || || ||||| || ||||| || | |||||| | | ||| || Sbjct 253600 CATTCTTTCAAAGTGTCGTAAATGCCGTCGATTGAGTCGTCTTTCATAGCCACCAAAAAG 253541 Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 || |||||||| ||| | ||| ||||||||||||| || || | ||| || Sbjct 253540 CACGACGACATCTGTGGG--TGGGGAGTACCGGCATTGAACAACGTAGGAGACGCATGCG 253483 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGT 81712 |||| || | ||||||||| | || |||||| || | | || | || || | Sbjct 253482 TGAAGTACTTGAGTGACATCAGATTGTAAGTTTCCAATACCCTGGCGATGTTGTTGCCAT 253423 Query 81713 GAATACCGATAGCTACACGCATAAACA 81739 ||||||||| ||| |||||||||| || Sbjct 253422 GAATACCGACAGCCACACGCATAATCA 253396 >seq10 Length=558261 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 80955 GATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014 |||||| ||||||||| || || |||||||| ||||||||||| || |||||||| | Sbjct 194732 GATTTCACAGCACAAATTGGATGATTTAATTGTCCCCAGGTTTTTTTGATTTGACTTTGT 194791 Query 81015 GTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 ||||| | ||| |||||| |||| | || ||| ||||| || || Sbjct 194792 ATTGCACGAGTCTTTGTAGAGCATGAAAGGACCACCAGTCTCAACTTG 194839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310228906880