Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=1828985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 319/501 (64%), Gaps = 23/501 (5%) Strand=Plus/Plus Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29956 |||||||| || || || || | || | ||||| || || || | | |||||| Sbjct 1669740 TAGACGTGCGCATCGCCAAGAGTATGAATGAACTCGCCTGGCTCCATGTCACAGACGTGT 1669799 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || ||||| | || | || | ||| || || ||||| || |||||||| ||||| Sbjct 1669800 GCGATCATTTTGGTTAAAAGTGCGTACGATGCAATATTAAAAGGAACCCCGAGTCCCATA 1669859 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT---------CCGTCGCTC------ 30061 || | ||||||||||| ||| ||||||| |||| | || || ||| Sbjct 1669860 TCGCAGGACCTCTGGTATAGCAGACACGACAGCTTTGACTTTTCGCCCTCCCTCTTGGGG 1669919 Query 30062 ------ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30115 || || || || | | | ||||| ||||| | ||||| | || || Sbjct 1669920 AGAGTGACATAGAAATGCGAAAAAACATGGCAAGGAGGTAATGCCATTTTTGCAAAATCC 1669979 Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175 || ||||| |||| || || || | | || ||||| | ||||| ||| Sbjct 1669980 GGTGGATTCCAAGCGCTCATAATAATTCTGCGATCCGTGGGGTTTGTTTTGATGCGGTGT 1670039 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTA 30234 | ||| ||||| || || | || || ||| || | | || ||||| || Sbjct 1670040 ATAACGTCTTGCAATTGGTCAAAACCTTGTCCACTGTAATCATCATCACACGTCCGA-TA 1670098 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||||| |||||||||||||| |||||||| || || || ||||| |||||||| || Sbjct 1670099 TTCTGCACCGAAATGCCTCCATTGGAACCCATAAACAGGACCCAGATCTCCCTCACGTCT 1670158 Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 | || ||| ||||||||| | |||||||| ||||| | ||||| || || || Sbjct 1670159 ATCAGTCAATCCCAGCTTGTCCAAGTACTCTCTGGAGCCGTTTCCTTCCCATATTTTGAC 1670218 Query 30355 CCCCTTCTCAGAGAGCTCTTT 30375 || | || || || | ||| Sbjct 1670219 TCCTTGTTCCGACAGTTTTTT 1670239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310281154208