Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 1e-17
>seq1
Length=1828985
Score = 104 bits (114), Expect = 1e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| |||||||| |||||||| ||||| || || || | |||| | |||||
Sbjct 1304791 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTC 1304732
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
| |||||| || ||||| || || | || ||||| || || | |||||||| ||
Sbjct 1304731 CAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTG 1304672
Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
||||| | || ||| | ||| ||||| ||||||||||| || || || |
Sbjct 1304671 AATCTTGC-TCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCT 1304613
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || ||||||||||||||||||||
Sbjct 1304612 TTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| |||||||| |||||||| || || || || || | |||| | |||||
Sbjct 1305019 CACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304960
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
| |||||| || ||||| || || | || ||||| || || | |||||||||||| |
Sbjct 1304959 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT-T 1304901
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|| || | || ||| | ||| ||||| ||||| || | || || || |
Sbjct 1304900 GAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCT 1304841
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || |||||||| |||||||||||
Sbjct 1304840 TTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| |||||||| |||||||| || || || || || | |||| | |||||
Sbjct 1304563 CACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304504
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
| |||||| || ||||| || || | || ||||| || || | || |||||||||
Sbjct 1304503 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTG 1304444
Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
||||| | || ||| | ||| ||||| |||||||||| || || || |
Sbjct 1304443 AATCTTGC-TCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCT 1304385
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| || || || || || |||||||||||||| ||
Sbjct 1304384 TTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729507941592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |