Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-17 >seq1 Length=1828985 Score = 104 bits (114), Expect = 1e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| |||||||| |||||||| ||||| || || || | |||| | ||||| Sbjct 1304791 CACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTC 1304732 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | |||||| || ||||| || || | || ||||| || || | |||||||| || Sbjct 1304731 CAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTG 1304672 Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||||| | || ||| | ||| ||||| ||||||||||| || || || | Sbjct 1304671 AATCTTGC-TCTTCACGTTGTCAATAGTGTCAGAAGACTCCACTTCCAGAGTAATGGTCT 1304613 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || |||||||||||||||||||| Sbjct 1304612 TTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| |||||||| |||||||| || || || || || | |||| | ||||| Sbjct 1305019 CACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304960 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | |||||| || ||||| || || | || ||||| || || | |||||||||||| | Sbjct 1304959 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCT-T 1304901 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 || || | || ||| | ||| ||||| ||||| || | || || || | Sbjct 1304900 GAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCT 1304841 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || |||||||| ||||||||||| Sbjct 1304840 TTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| |||||||| |||||||| || || || || || | |||| | ||||| Sbjct 1304563 CACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTTCTGCCATCTTC 1304504 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | |||||| || ||||| || || | || ||||| || || | || ||||||||| Sbjct 1304503 CAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTG 1304444 Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||||| | || ||| | ||| ||||| |||||||||| || || || | Sbjct 1304443 AATCTTGC-TCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGAGTAATGGTCT 1304385 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || || || || || |||||||||||||| || Sbjct 1304384 TTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729507941592