Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq9 105 6e-18
>seq1
Length=1828985
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| |||||||| ||| |||| || ||| | |||||||| ||||||||| | ||
Sbjct 1304354 ATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCTTCG 1304413
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||||||||| ||||| || ||||| || ||
Sbjct 1304414 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAG 1304473
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| | || | || || |||||
Sbjct 1304474 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304533
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| ||||| | || ||||| | | |||| ||||| ||
Sbjct 1304534 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGACTGCGCGGTGGTAT 1304583
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| ||||||| ||| | |||||||| |||||||| | ||
Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| || || || || || ||||| || ||
Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| | || | || || ||||||
Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| ||||| | || ||||| | | ||||| ||||| ||
Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGGTAT 1304811
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||||| ||| | || ||||| || |||||| | ||
Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||||||||| || || || ||||| || ||
Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| | || | || || |||||
Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196
|| |||||||| ||||| | || |||||
Sbjct 1304990 ATACAAAAGGAATCGACTCTCCACTTGGT 1305018
>seq9
Length=718525
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| || || |||| || ||| | || ||| | ||||| ||| | || ||| | |||
Sbjct 427480 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCGGACACCATT 427421
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || ||||||||||| || || || || || || || ||| | ||
Sbjct 427420 GACAATGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCTGACCAGCAGAGATTG 427361
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||| || || || | |||||| | ||| | ||||| |||||||| || |||
Sbjct 427360 ATCTTCGCTGGTAAGCAGCTTGAAGACGGCAGAACCTTGTCCGACTACAACATCCAGAAG 427301
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || || || ||||| ||| | ||| | ||||| ||
Sbjct 427300 GAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTAT 427260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918269524480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |