Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=1828985 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||| | || ||||| || |||||||| || || || || | Sbjct 1304810 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAGACCATCACTCTAGAGGTGGAATCTTCT 1304869 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| || ||| | || ||||| || Sbjct 1304870 GACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGACCAG 1304929 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || |||||| ||||||| | | ||||| || ||||| Sbjct 1304930 CAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAT 1304989 Query 23791 ATACAAAAAGAGTCCAC 23807 |||||||| || || || Sbjct 1304990 ATACAAAAGGAATCGAC 1305006 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||||||||| || || || | || ||||| || || ||||| ||||| || || Sbjct 1304351 AAAATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACCATTACTCTGGAAGTGGAATCT 1304410 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||||||| |||| | | || || ||| ||||| |||||| | || ||||| Sbjct 1304411 TCGGACACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAAGGTATTCCACCAGAC 1304470 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || || ||||| || |||||| ||||||| | | ||||| || ||| Sbjct 1304471 CAGCAAAGATTGATTTTTGCAGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTAC 1304530 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || ||||| || || || Sbjct 1304531 AATATCCAAAAGGAATCGAC 1304550 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||| | || ||||| || || ||||| ||||| || || | Sbjct 1304582 ATGCAGATTTTTGTGAAAACCTTGACCGGAAAGACCATTACTCTGGAAGTGGAGTCTTCT 1304641 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| || || || ||| | || ||||| || Sbjct 1304642 GACACTATTGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 1304701 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||| || |||||| ||||||| | | ||||| || |||||| Sbjct 1304702 CAAAGATTGATTTTTGCGGGAAAACAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 1304761 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | || || || | || ||||| || || Sbjct 1304762 ATCCAAAAGGAATCGACTCTCCACTTGGTGCTCAGATTGCGTGGTGG 1304808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009501132192