Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 2e-35
seq9 159 8e-34
seq3 152 1e-31
>seq1
Length=1828985
Score = 165 bits (182), Expect = 2e-35
Identities = 171/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| ||||| || || | ||||||||| ||||| ||||||| |||||| || | |||||||
Sbjct 1304574 CGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTT 1304515
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| |||||||| | || || || || || || | || ||| ||||| || |||||||||
Sbjct 1304514 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCT 1304455
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||| ||||| |||||| || || ||||| || | |||||| || |
Sbjct 1304454 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGA 1304395
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtttt 225716
|| || ||||| || |||||||| |||| || | ||||||||
Sbjct 1304394 GTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
Score = 159 bits (176), Expect = 8e-34
Identities = 168/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| ||||| || || | ||||||||| ||||| ||||| | |||||| || | |||||||
Sbjct 1305030 CGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTT 1304971
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| |||||||| | || || || || || || | || ||| ||||| || ||||||||
Sbjct 1304970 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCC 1304911
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||| ||||| |||||| || || ||||| || | |||||| ||||
Sbjct 1304910 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGA 1304851
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713
||||| ||||| || ||||| ||||| | ||| | |||||
Sbjct 1304850 GTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || ||||| || |||||||| ||||||||
Sbjct 544708 GAAAATTTGACCATCGGTAATGGAAATAACGTTGGTAGGAATGTAAGCAGAGACATCACC 544649
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | ||| || || || || | || ||||||||
Sbjct 544648 ACCTTGGGTTTCAATAACTGGCAAAGCAGTCAAAGAACCACCACC 544604
>seq9
Length=718525
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||| || |||| ||||| |||| ||| ||||| ||
Sbjct 427274 TCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCC 427333
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| |||||||| ||||||||||| | || || ||||| || |||||||| |||||
Sbjct 427334 GTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTT 427393
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 427394 GTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGAT 427453
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| || ||
Sbjct 427454 GGTCTTACCAGTCAAGGTCTT 427474
>seq3
Length=955168
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | ||| | |||||||| || |||| ||||| || | ||||||||| ||
Sbjct 273722 TCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 273781
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | |||||| ||||| ||||| | || |||||||| || ||||||||||||||
Sbjct 273782 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTT 273841
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| || ||||| ||| ||| ||||||||||| || | ||||| || | |||||
Sbjct 273842 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 273901
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtttt 225716
|||||| || || | || || | ||| | |||||| ||
Sbjct 273902 CGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530833296656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |