Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq9 159 8e-34 seq3 152 1e-31 >seq1 Length=1828985 Score = 165 bits (182), Expect = 2e-35 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||| || || | ||||||||| ||||| ||||||| |||||| || | ||||||| Sbjct 1304574 CGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAAGTT 1304515 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| | || || || || || || | || ||| ||||| || ||||||||| Sbjct 1304514 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCT 1304455 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| |||||| || || ||||| || | |||||| || | Sbjct 1304454 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCACTTCCAGA 1304395 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtttt 225716 || || ||||| || |||||||| |||| || | |||||||| Sbjct 1304394 GTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||| || || | ||||||||| ||||| ||||| | |||||| || | ||||||| Sbjct 1305030 CGTAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTT 1304971 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| | || || || || || || | || ||| ||||| || |||||||| Sbjct 1304970 CTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCC 1304911 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| |||||| || || ||||| || | |||||| |||| Sbjct 1304910 TCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGA 1304851 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713 ||||| ||||| || ||||| ||||| | ||| | ||||| Sbjct 1304850 GTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || ||||| || ||||| || |||||||| |||||||| Sbjct 544708 GAAAATTTGACCATCGGTAATGGAAATAACGTTGGTAGGAATGTAAGCAGAGACATCACC 544649 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||| ||||| | ||| || || || || | || |||||||| Sbjct 544648 ACCTTGGGTTTCAATAACTGGCAAAGCAGTCAAAGAACCACCACC 544604 >seq9 Length=718525 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | ||||||||| || |||| ||||| |||| ||| ||||| || Sbjct 427274 TCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTGCC 427333 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| |||||||| ||||||||||| | || || ||||| || |||||||| ||||| Sbjct 427334 GTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTT 427393 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || |||||||| || | ||| || || || ||||| Sbjct 427394 GTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGAT 427453 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || ||||| || || Sbjct 427454 GGTCTTACCAGTCAAGGTCTT 427474 >seq3 Length=955168 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| | |||||||| || |||| ||||| || | ||||||||| || Sbjct 273722 TCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAAGTTCTGCC 273781 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | |||||| ||||| ||||| | || |||||||| || |||||||||||||| Sbjct 273782 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGGAATACCTTCCTT 273841 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| || ||||| ||| ||| ||||||||||| || | ||||| || | ||||| Sbjct 273842 GTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 273901 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtttt 225716 |||||| || || | || || | ||| | |||||| || Sbjct 273902 CGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530833296656