Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6 280 1e-70 >seq6 Length=784318 Score = 280 bits (310), Expect = 1e-70 Identities = 579/848 (68%), Gaps = 25/848 (3%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||||| || || |||| |||||||| ||||| || || || ||| Sbjct 310608 AACACCAGCCTTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAG 310667 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 |||||| |||||||| |||||||| ||||| | | | || ||| || ||| | Sbjct 310668 CGAAATGTTTTCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAA 310727 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | ||||| ||||| |||||||| | ||| || |||| | ||| ||| || Sbjct 310728 AGCCACCAACAATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCAT 310787 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAA-AACTCTTGTTCTATAGTTACGGCTT 4485 || | ||| || || || || | | | ||| ||| || | || || || || | Sbjct 310788 GCCCAGCAATGATACGGGCAGGGCATCTCTAAAATAACGCT-GCTCAATTTCAACCGCCT 310846 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAA 4543 |||| || || ||||| | || ||| ||| || |||||| |||| | |||||| Sbjct 310847 CTGTAATGAT-TCTTTCAACG-ATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAG 310904 Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603 |||||||||||||| ||| |||||||| ||||||| ||| || || || ||||| || Sbjct 310905 CAAACACGCAAAATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGT 310964 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 || || ||||| |||||| ||||||| ||||| || || || ||||| || || || || Sbjct 310965 CAAACCCGGCATCAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAA 311024 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCTGGCTTTGT 4722 || | ||||| || || ||||| || || |||| ||| || | ||| ||| || Sbjct 311025 AAAAACACCTTCAACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCT-TCTTCGT 311083 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| |||||| ||| ||||| | ||| |||| || | ||| || || | || | Sbjct 311084 CTTGAATCCACCTTATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTG 311143 Query 4783 CGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | || || || | ||||| || ||||| | || || || || || ||||| Sbjct 311144 CATTGAACAAAAACTCACTTTCTT---TGGGGTCCTTGATGTAGGTATCAATCAGTAGCG 311200 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 || | || || || || ||||| || || |||||||||||||| ||| | |||| Sbjct 311201 AGTAAGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTT 311260 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 | | ||| ||||| | | || |||| || | |||||||| ||||| || || Sbjct 311261 CCGGACTTTGCACTTCAGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCG 311320 Query 4960 TGGCTGCAAAAAACGCCAAAAC-----ATGAGATATAAAGTAC-TGTTCG-TCAGGCTTA 5012 |||||||||||||| | || || || |||| || | | |||| ||| || Sbjct 311321 ATGCTGCAAAAAACGCTAGCACCCGCGATAGGAAATAACGTTCATTTTCGTTCATGC--- 311377 Query 5013 AGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072 | || ||||| | | | | ||| || | || ||| | ||| || | |||||||||||| Sbjct 311378 -GATTGTTCCAATCGTGTATATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGAC 311436 Query 5073 GCTTCCGC 5080 || || || Sbjct 311437 GCCTCGGC 311444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049475087992