Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6 212 9e-50 seq1 158 2e-33 seq10 104 3e-17 >seq6 Length=784318 Score = 212 bits (234), Expect = 9e-50 Identities = 586/890 (66%), Gaps = 10/890 (1%) Strand=Plus/Plus Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 ||| ||||||||||| || || || | | || || |||||||| |||||||| ||||| Sbjct 310638 TTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTTTCCATGAAATCAAAAGGATT 310697 Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989 | | ||||||| || | | || || | | || |||||| ||||| ||||| Sbjct 310698 GGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAACAATCTATCAGCAACAAATTC 310757 Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049 | |||| ||||||| || ||||| || | | | || || || || || | Sbjct 310758 CACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAATGATACGGGCAGGGCATCTCT 310817 Query 48050 AAGA-AACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCAC 48108 || | ||| || | || || || || || || || | || ||| | Sbjct 310818 AAAATAACGCT-GCTCAATTTCAACCGCCTCTGTAATGATTCTTTCAACGATTTTTGGAT 310876 Query 48109 TTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCAT 48168 |||| || ||| ||| ||||| ||||| |||||||| ||| | |||||||| Sbjct 310877 TTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAAATCCGTATGTAAACCTTCAT 310936 Query 48169 CTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCC 48228 |||| | ||| | || || |||||||| | ||| ||||| | || |||||||||| Sbjct 310937 CTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCATCAAACCTTTCTTTTTGAGCC 310996 Query 48229 AAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAA 48288 | || || || || ||||| || || || || | ||||| || || ||||| || | Sbjct 310997 AGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTCAACAGCTGCAAAAGCCACCA 311056 Query 48289 GTCTCTCTCCG-TAACTG--GCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCT 48345 ||| || ||| || || |||||| || ||||||| | ||||| | |||||| | Sbjct 311057 ATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCTTATGGCCCATTGAGCCTT-T 311115 Query 48346 TCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCT 48404 ||||| | || || ||||| || ||||| || | ||| | |||| ||| || Sbjct 311116 TCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAACTCACTTTCTTTGGGGTCC 311175 Query 48405 TTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATC 48464 || | ||| ||||| || | || || | ||||||||||| ||||| || || Sbjct 311176 TTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTGAATGTTTTCCATCATGATT 311235 Query 48465 TGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCC 48524 |||||||||||||||||| | ||||| | | || || || | | | || ||| || Sbjct 311236 TGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTCAGCAGAGAAATTTTCCACC 311295 Query 48525 AAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAA 48584 | ||| || || ||||| ||||| || |||||||| |||| || | | ||| Sbjct 311296 AGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGCTAGCACCCGCGATAGGAAA 311355 Query 48585 TATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACT 48641 || ||| || ||| | || ||||| || | ||||| || |||| ||| | | Sbjct 311356 TAACGTTCATTTTCGTTCATGCGATTGTTCCAATCGTGTATATCCTTGGATAGATCGATT 311415 Query 48642 TCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTAT 48701 || || || |||||||| || ||||| || |||||| | ||| || ||| ||| Sbjct 311416 TCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAGGCTTGCCAGATTTCATGGTAC 311475 Query 48702 TGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATAGGTTC 48751 | ||| ||||| | ||| ||||| | ||||| ||| || | ||| || Sbjct 311476 TTGATGGGGAACAGAACGAATCTGCGTTTATTTTCTGCCAGCAAAGGCTC 311525 >seq1 Length=1828985 Score = 158 bits (174), Expect = 2e-33 Identities = 483/735 (66%), Gaps = 20/735 (3%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||| || |||| |||| ||| | | ||| || |||| |||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| || |||| ||||| || | || |||||| | ||||| ||||| ||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGAT--CGAGAAACTCC 78101 | ||||| || | | ||| || || || || | |||| ||| | | ||| || Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 78102 ATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCT 78161 | ||| || ||||||||||| || || || | || | | | || |||| ||| ||||| Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 78162 CCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTA 78221 || ||||| | || | || ||||| || | || | | ||| || |||| |||||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 78222 GATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATC 78281 || ||||| ||||| || | ||| ||| || | | |||||| || ||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 78282 CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCC 78341 || || || || || | ||||| || | ||| || |||||| || ||||| || || Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 78342 TCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 78401 || || ||| || |||| | | ||| || ||||| || | || ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461 || ||||| || || || ||||| |||||||| || | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 78462 GTTT-CAATA-GCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAA 78517 |||| ||||| ||| | |||| ||| |||||| || || || |||||||| | Sbjct 253453 GTTTCCAATACCCTG--GCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAAT 253398 Query 78518 CATATGCTGAGGTCTTT---CAACC-GTCTTATTATTTATTTTCAACAAGTATGATTTTT 78573 || ||| || ||||||| ||||| ||| || ||| | | | ||| || | Sbjct 253397 CAAATGTTGTGGTCTTTCTGCAACCTGTC----CGTTGATTCTGAGAAGGTAGGAGCGCT 253342 Query 78574 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAAT 78633 | | || || || |||||||||||||| ||| || | ||||| | ||| |||| | Sbjct 253341 CAAGGGTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGT 253282 Query 78634 TTAGTTTATCTTTGT 78648 | || | || |||| Sbjct 253281 TCAGCTCGTCCTTGT 253267 >seq10 Length=558261 Score = 104 bits (114), Expect = 3e-17 Identities = 340/520 (65%), Gaps = 20/520 (4%) Strand=Plus/Plus Query 77921 CCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAA 77980 || |||||| || || || || || | |||||||| ||||| ||| | | || Sbjct 194921 CCTTTCAAACTCTTCACCATAACAGTCCTGTAATCCAGGAACTTCATCTGGCGAAAATAA 194980 Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040 ||||| ||| |||| || |||||||| |||| ||| || |||||||| || Sbjct 194981 AGACCAAGAGGCATTGTCCTGGACACGTTTCATGAAGATATCTGGAATCCATAGGGCGCA 195040 Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT---AAGATCGAGAAA 78097 |||||||| || | || ||| || || || || ||||| ||| | | || Sbjct 195041 GAATAGATCGCGCGCCCTTAATTCCTCTTTGCC---ATGGTTTTTGCGAAGTTGTAAGAA 195097 Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA-CTCCAGGTCGTTTAT 78156 || | || || ||||||||||| |||| || | ||| | || | || || ||||||| Sbjct 195098 ATCGAAAACGTCCGAATGCCATGGCTCTAAGTAGA-TGCAAAAAGCACCTGGGCGTTTAT 195156 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 | || ||||| || | |||||| || || || || |||| |||||||| || | || | Sbjct 195157 TTCCACCCTGGTCAACATATCTTGCAGTATTGTTGAAAACCCTCAACATCGGTACAAGTC 195216 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATT-ACTAATG 78275 | || || || || || | || || || ||| || || | | ||||| || Sbjct 195217 CATTTGACGTCCCGTTGGACCCTGATATGTAAGAGCCCGTTCCTCTGATATTCGATACAT 195276 Query 78276 GATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG--- 78332 || ||||| |||||||| || || || || | ||| |||| ||| | || Sbjct 195277 GA-ATCCCAATTCCTCCAGCGCCTTTCGAGATCATAGC----AGTTT-TATGAAGCGTGC 195330 Query 78333 --TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGAT 78390 || ||||| || || || ||||||||| | ||||||||| |||| | | Sbjct 195331 GATAAATACCATCGATTGAATCCTCCATCATGCCCACTAGAAAACAGGATGACAGGTACT 195390 Query 78391 GATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 | | || || || || ||||| | ||||| |||||||| Sbjct 195391 GGTTCACCGTACCAGCGTTAAAAAGGGTCGGTGATGCATG 195430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668591599360