Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq6 214 3e-50 seq1 196 7e-45 seq10 127 3e-24 >seq6 Length=784318 Score = 214 bits (236), Expect = 3e-50 Identities = 596/909 (66%), Gaps = 8/909 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | ||| ||||||||||| || || || | | || || ||| Sbjct 310618 TTTTGGTAATCCGAAACTCTTTTTTCGAAAAAATTGGTCTTACCAGCTAGCGAAATGTTT 310677 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| |||||||| ||||| | || ||||||| || | | || || | | | Sbjct 310678 TCCATGAAATCAAAAGGATTGGATACCTTATAAAACTTGTCATTACCCAAAGCCACCAAC 310737 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 | |||||| ||||| ||||| | ||| ||||||| || ||||| || | | | Sbjct 310738 AATCTATCAGCAACAAATTCCACATATTGATTCATCAAATCGGCGTTCATGCCCAGCAAT 310797 Query 46519 TTGACCGGTAGAGCCTCCGTAAGA-AACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || || || || || ||| | ||| || | ||||| || || || | || || Sbjct 310798 GATACGGGCAGGGCATCTCTAAAATAACGCT-GCTCAATTTCAACCGCCTCTGTAATGAT 310856 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | || ||| | |||| || |||| ||| ||||| ||||| ||||| Sbjct 310857 TCTTTCAACGATTTTTGGATTTGGCTTATTTTTCAAGTGTGCAAACAGCAAACACGCAAA 310916 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||| ||| | ||||||||||| | ||| | || || |||||||| | || ||||| Sbjct 310917 ATCCGTATGTAAACCTTCATCTCTGCAAATGAGCTCATTGGAAAATGTCAAACCCGGCAT 310976 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 | || |||||||||||| || || || || ||||| || || || || | ||||| Sbjct 310977 CAAACCTTTCTTTTTGAGCCAGAAAATGGCTGCAAAAGAACCTGAGAAAAAAACACCTTC 311036 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCG-TAACTG--GCATCATTATGAATCCACCT 46814 ||||| || || || || | ||| || ||| || || | || | ||||||||||| Sbjct 311037 AACAGCTGCAAAAGCCACCAATCTTTCACCGAAAAGTGCTTCTTCGTCTTGAATCCACCT 311096 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 | ||||| | |||||||| || | || || ||||| || ||||| || | ||| Sbjct 311097 TATGGCCCATTGAGCCTTTTCTTTGATTTGCGGGATAGTTTCGATTGCATTGAACAAAAA 311156 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | |||| | || || | || ||||| || | || || | || || || Sbjct 311157 CTCACTTTCTTTGGGGTCCTTGATGTAGGTATCAATCAGTAGCGAGTAAGTCTCGGAGTG 311216 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 ||||||||| || || |||||||||||||||||| | ||||| | | | || || || Sbjct 311217 AATGTTTTCCATCATGATTTGAAATCCGTAAAAACATTTGGCTTCCGGACTTTGCACTTC 311276 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | | || ||| || ||| || || ||||| ||||| || |||||||| || Sbjct 311277 AGCAGAGAAATTTTCCACCAGATTTTCGTTGACTATCCCATCCGATGCTGCAAAAAACGC 311336 Query 47055 CAATACATGTTTAATAAAATATTTTTCA---TCGGTAGTCAGTTTATTCCAGTCATTGAT 47111 | || | | ||||| |||| ||| | | | || ||||| || | || Sbjct 311337 TAGCACCCGCGATAGGAAATAACGTTCATTTTCGTTCATGCGATTGTTCCAATCGTGTAT 311396 Query 47112 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACAT 47171 ||| || |||| ||| | ||| || || ||||| || |||||||| || |||||| Sbjct 311397 ATCCTTGGATAGATCGATTTCCTCCGCGGTCCAAAACGACGCCTCGGCGCGTTTATAGGC 311456 Query 47172 ATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAG 47231 | ||| || ||| | || | ||| || || | ||| ||||| | ||||| ||| || Sbjct 311457 TTGCCAGATTTCATGGTACTTGATGGGGAACAGAACGAATCTGCGTTTATTTTCTGCCAG 311516 Query 47232 TATAGGTTC 47240 | ||| || Sbjct 311517 CAAAGGCTC 311525 >seq1 Length=1828985 Score = 196 bits (216), Expect = 7e-45 Identities = 595/905 (66%), Gaps = 22/905 (2%) Strand=Plus/Minus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 |||||| || |||| |||| ||| | | || ||| |||| | ||| | | || | Sbjct 253991 TTCAAACTCTGCTCCATAAACGTCAGCAAGTCCTGGAGCTTCACTTGGAGAGAACAGAGT 253932 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 ||| || |||| ||||| |||| || |||||| | ||||| ||||| ||||| || Sbjct 253931 CCAATCGCCATTTTCCTGGACCCTTTGCATAAACAAGTCAGGAATCCAAAGAGCTGGGAA 253872 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT--AGGAACTCC 76696 | ||||| || | | ||| || || || || | |||| ||| | | || || Sbjct 253871 CAAATCTCTGGCACGAATTTCCTCCTTACC-GTGGT-TTTTGCGGATGTCAACAAAATCG 253814 Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756 | ||| || ||||||||||| || || || | || | | |||| |||| ||| ||||| Sbjct 253813 AAAATGTCTGAATGCCATGGCTCAAGGTACAGAGCAAAAGCACCTGGTCTTTTGTTACCA 253754 Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816 || ||||| | || | |||||||| || | || | | ||| || |||| ||||| Sbjct 253753 CCTTGATCAACGTAGCGAGCAGTGTTGTTGAAGACACGAATCATGGGGATAAGACCGTTG 253694 Query 76817 GATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGG 76876 || || || ||||| || | ||| ||| || | ||||| || |||| | Sbjct 253693 GAAGTTCCGTTTGTACCGGCAATGTAAGACCCGGTCGAGCGAATGTTGTGAATATGCAAT 253634 Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || || || |||||||||| | |||||| |||||| ||||| || ||||| Sbjct 253633 CCGATACCGCCCGCAGTTTTAGAGATCATAGCACATTCTTTCAAAGTGTCGTAAATGCCG 253574 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || || || || |||| | | ||| || ||||| || | || ||| Sbjct 253573 TCGATTGAGTCGTCTTTCATAGCCACCAAAAAGCACGACGACATCTGTGGGTGGGGAGTA 253514 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| ||||| |||||||| ||||| ||||| | || || | |||||||| Sbjct 253513 CCGGCATTGAACAACGTAGGAGACGCATGCGTGAAGTACTTGAGTGACATCAGATTGTAA 253454 Query 77057 GTTT-CAATA-ACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAA 77112 |||| ||||| ||| | || | ||| |||||| || ||||| |||||||| | Sbjct 253453 GTTTCCAATACCCTG--GCGATGT--TGTTGCCATGAATACCGACAGCCACACGCATAAT 253398 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 || ||| || |||| |||| || || || ||| | | | ||| || || | Sbjct 253397 CAAATGTTGTGGTCTTTCTGCAACCTGTCCGTTGATTCTGAGAAGGTAGGAGCGCTCAAG 253338 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 || || || |||||||||||||| ||| || | ||||| | ||| | || || || Sbjct 253337 GGTCTTGAAGCCAAAATAGTTGTAATTAAAATCGCGGTCGTAGACAATTGCAGAGTTCAG 253278 Query 77233 TTTGTCCTTATATTTGGTAACAATATCCATGAC--AGTGGTAGAAATAATTGGAGATCGT 77290 | |||||| | | || ||||| || ||| || || || || || | Sbjct 253277 CTCGTCCTTGTTGTCCTGCACGATATCGTACACCTCCTGG--GAGATCATGGGCGAGTGG 253220 Query 77291 ATTCCATTTTTAGGATTAACATAGTTAAATAAGT---CTTCCATTACGTCGCTAAATAGt 77347 |||||||| || || || || || | || |||| ||| || || | ||| | Sbjct 253219 ATTCCATTCTTGGGGTTCACGTAATGGAA-AAGTTCGCTT--ATCACCTGCGAAAACTGC 253163 Query 77348 ttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 || | |||| ||||| ||||| || | ||| |||||||| || | | |||| |||||| Sbjct 253162 TTGGTGGTTTGTTTGTGAAGATTTGAGATGGCAATTCTAGCGGCCAAAGTTGCGTAGTCA 253103 Query 77408 GGATG 77412 ||||| Sbjct 253102 GGATG 253098 >seq10 Length=558261 Score = 127 bits (140), Expect = 3e-24 Identities = 352/530 (66%), Gaps = 16/530 (3%) Strand=Plus/Plus Query 76516 CCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAA 76575 || |||||| || || || || || | || |||||| ||||| || | | || Sbjct 194921 CCTTTCAAACTCTTCACCATAACAGTCCTGTAATCCAGGAACTTCATCTGGCGAAAATAA 194980 Query 76576 TGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 76635 ||||| ||| |||| || |||||||| |||| ||| || |||||||| || Sbjct 194981 AGACCAAGAGGCATTGTCCTGGACACGTTTCATGAAGATATCTGGAATCCATAGGGCGCA 195040 Query 76636 AAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT---AAGATCTAGGAA 76692 |||||||| || | || ||| || || || || ||||| ||| | || ||| Sbjct 195041 GAATAGATCGCGCGCCCTTAATTCCTCTTTGCC---ATGGTTTTTGCGAAGTTGTAAGAA 195097 Query 76693 CTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA-CACCCGGTCGTTTAT 76751 || | || || ||||||||||| |||| || || || | || |||| || ||||||| Sbjct 195098 ATCGAAAACGTCCGAATGCCATGGCTCTAAGTAGAT-GCAAAAAGCACCTGGGCGTTTAT 195156 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || ||||| || | |||||| ||||| || || |||| |||||||| || | || | Sbjct 195157 TTCCACCCTGGTCAACATATCTTGCAGTATTGTTGAAAACCCTCAACATCGGTACAAGTC 195216 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAG 76871 | || || || || || | || || || ||| || | | | ||||| ||| Sbjct 195217 CATTTGACGTCCCGTTGGACCCTGATATGTAAGAGCCCGTTCCTCTGATATT--CGATAC 195274 Query 76872 AT--AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTT-TCAA-TGTGTCA 76927 || | || |||||||| || ||| ||||| | || ||| || | || ||| | Sbjct 195275 ATGAATCCCAATTCCTCCAGCGCCTTTCGAGATCATAG--CAGTTTTATGAAGCGTGCGA 195332 Query 76928 TAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 76987 || || || || || ||| ||||||||| | ||||||||| |||| | || Sbjct 195333 TAAATACCATCGATTGAATCCTCCATCATGCCCACTAGAAAACAGGATGACAGGTACTGG 195392 Query 76988 TGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037 | || || || || ||||| | || || ||||||||| |||| |||| Sbjct 195393 TTCACCGTACCAGCGTTAAAAAGGGTCGGTGATGCATGAATGAAGTATTT 195442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934186119680