Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 3e-39
seq9 143 6e-29
seq3 138 2e-27
>seq1
Length=1828985
Score = 178 bits (196), Expect = 3e-39
Identities = 180/232 (78%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| | || |||| || | || ||| |||||||| ||||||||||
Sbjct 1304581 ACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGA 1304522
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | |||||| || | |||||| || ||||| ||||| | ||| ||||| ||
Sbjct 1304521 CAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304462
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||| ||||||||||| ||||| ||| || ||| | || ||||||||||||| ||| |
Sbjct 1304461 AATACCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCA 1304403
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|||| ||||| || ||||| || ||||||||||| || || |||||||||||
Sbjct 1304402 CTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| || |||||||||| | || | |||||| || | |||||| || |||||
Sbjct 1305001 TTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAA 1304942
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGG 283026
||||| | ||| ||||| |||||||||||||||||||| ||| ||||| || |||
Sbjct 1304941 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATC-TTGCTCTTCACGT 1304883
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
| || |||||||| |||| ||| || || |||||||| ||||| || ||||| || || |
Sbjct 1304882 TGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCA 1304823
Query 283087 CGAATATCTGCAT 283099
|||| ||||||||
Sbjct 1304822 CGAAAATCTGCAT 1304810
Score = 154 bits (170), Expect = 3e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||| | || |||| || | || ||| |||||||||||||||||||
Sbjct 1304809 ACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGA 1304750
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | |||||| || | |||||| || ||||| ||||| | ||| ||||| ||
Sbjct 1304749 CAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304690
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||||||||| || || ||| ||||| || ||| | || |||||||| |||| || |
Sbjct 1304689 AATACCCTCCTTATCCTGAATC-TTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCA 1304631
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| ||||| || ||||| || ||||| || || || || ||||||||
Sbjct 1304630 CTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
>seq9
Length=718525
Score = 143 bits (158), Expect = 6e-29
Identities = 154/201 (77%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||| || |||||||||||||| | |||| || | ||| || ||
Sbjct 427281 ACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCTTC 427339
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
|| || || || || |||||||| | || |||||| ||||||||||||||||||||
Sbjct 427340 AAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG 427399
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || || | || || |||||||||| ||| ||||| | |||||| |||||
Sbjct 427400 AATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGTCTT 427459
Query 283070 ACCCGTCAAAGTCTTAACGAA 283090
||| ||||| ||||| || ||
Sbjct 427460 ACCAGTCAAGGTCTTGACAAA 427480
>seq3
Length=955168
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || |||| || || ||| ||| || |||||||||||||| |
Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | ||| || || | || || || ||||||||||| | ||||||||| ||
Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| |||||||| || ||||| | || || | ||||| ||||| |||| || ||
Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||||||||| || | ||||| ||||| || ||||| ||
Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940
Score = 91.5 bits (100), Expect = 3e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039
||||| | ||| ||||| || || | ||| | | | | | ||| || || || || ||
Sbjct 848252 CCGTCAATGTCGTGCTCGACGTAAACGGTTCT-ACATTCTTCTTGAGTTGGAAAACCGTC 848194
Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099
| |||||||| |||| || ||||||| || ||||| |||||||| || || || ||
Sbjct 848193 AACTTGACCGTTGGCAATGGCTCTCATCAAGGTAGACTTACCAGCACCGTTAGGACCACA 848134
Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159
|||||||| | | | |||||| | || | || ||||| || | ||||| |
Sbjct 848133 TAGACCATATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTTAGCAAGATCTTGGC 848074
Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
||| || |||| |||||||||||| | ||| || || || ||
Sbjct 848073 ACCGTAAGCCAAAGAGAACTCACAGTTACATAGATCTTCACC 848032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738878127696
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