Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 178 3e-39 seq9 143 6e-29 seq3 138 2e-27 >seq1 Length=1828985 Score = 178 bits (196), Expect = 3e-39 Identities = 180/232 (78%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| | || |||| || | || ||| |||||||| |||||||||| Sbjct 1304581 ACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTCAGA 1304522 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||| || | |||||| || ||||| ||||| | ||| ||||| || Sbjct 1304521 CAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304462 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||| ||||||||||| ||||| ||| || ||| | || ||||||||||||| ||| | Sbjct 1304461 AATACCTTCCTTGTCTTGAATCTT-GCTCTTCACGTTGTCAATAGTGTCCGAAGATTCCA 1304403 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||| ||||| || ||||| || ||||||||||| || || ||||||||||| Sbjct 1304402 CTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATTTT 1304351 Score = 156 bits (172), Expect = 9e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| || |||||||||| | || | |||||| || | |||||| || ||||| Sbjct 1305001 TTCCTTTTGTATATTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAA 1304942 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGG 283026 ||||| | ||| ||||| |||||||||||||||||||| ||| ||||| || ||| Sbjct 1304941 AATCAATCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGAATC-TTGCTCTTCACGT 1304883 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || |||||||| |||| ||| || || |||||||| ||||| || ||||| || || | Sbjct 1304882 TGTCAATAGTGTCAGAAGATTCCACCTCTAGAGTGATGGTCTTTCCGGTCAAGGTTTTCA 1304823 Query 283087 CGAATATCTGCAT 283099 |||| |||||||| Sbjct 1304822 CGAAAATCTGCAT 1304810 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | || |||| || | || ||| ||||||||||||||||||| Sbjct 1304809 ACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCAGA 1304750 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | |||||| || | |||||| || ||||| ||||| | ||| ||||| || Sbjct 1304749 CAAAGTTCTGCCATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTGGTGG 1304690 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||| || || ||| ||||| || ||| | || |||||||| |||| || | Sbjct 1304689 AATACCCTCCTTATCCTGAATC-TTGCTCTTCACGTTGTCAATAGTGTCAGAAGACTCCA 1304631 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| ||||| || ||||| || ||||| || || || || |||||||| Sbjct 1304630 CTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 >seq9 Length=718525 Score = 143 bits (158), Expect = 6e-29 Identities = 154/201 (77%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| ||| || |||||||||||||| | |||| || | ||| || || Sbjct 427281 ACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAG-GTTCTGCCGTCTTC 427339 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || || || || || |||||||| | || |||||| |||||||||||||||||||| Sbjct 427340 AAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCCTCCTTGTCTTG 427399 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || || | || || |||||||||| ||| ||||| | |||||| ||||| Sbjct 427400 AATCTTGGACTTGACATTGTCAATGGTGTCCGAAGATTCAACTTCCAAAGTGATGGTCTT 427459 Query 283070 ACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| ||||| || || Sbjct 427460 ACCAGTCAAGGTCTTGACAAA 427480 >seq3 Length=955168 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || | || |||| || || ||| ||| || |||||||||||||| | Sbjct 273710 ACCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGA 273769 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||| || || | || || || ||||||||||| | ||||||||| || Sbjct 273770 CAAAGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| || ||||| | || || | ||||| ||||| |||| || || Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAAGACTCCAC 273889 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||||||||| || | ||||| ||||| || ||||| || Sbjct 273890 CTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCATCTT 273940 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039 ||||| | ||| ||||| || || | ||| | | | | | ||| || || || || || Sbjct 848252 CCGTCAATGTCGTGCTCGACGTAAACGGTTCT-ACATTCTTCTTGAGTTGGAAAACCGTC 848194 Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099 | |||||||| |||| || ||||||| || ||||| |||||||| || || || || Sbjct 848193 AACTTGACCGTTGGCAATGGCTCTCATCAAGGTAGACTTACCAGCACCGTTAGGACCACA 848134 Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159 |||||||| | | | |||||| | || | || ||||| || | ||||| | Sbjct 848133 TAGACCATATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTTAGCAAGATCTTGGC 848074 Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||| || |||| |||||||||||| | ||| || || || || Sbjct 848073 ACCGTAAGCCAAAGAGAACTCACAGTTACATAGATCTTCACC 848032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738878127696