Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01-
21] 24 sequences; 11,092,131 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 3e-26
seq9 113 3e-20
seq1 96.9 2e-15
>seq3
Length=955168
Score = 132 bits (146), Expect = 3e-26
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| ||||||| ||| | ||||| ||| | ||| ||||| ||||||||||| || | |
Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
| | || |||| |||| |||||| || ||||||||||| | ||| || || | |||
Sbjct 273771 AAAGTTCTGC-CGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287
| ||||||||| ||| ||||| ||| || ||| | |||||||| | || |||
Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGT--CGATGGTGTCAGAAGACTCC 273887
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || |||||||| || || |||||||| ||||| ||||||||
Sbjct 273888 ACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937
>seq9
Length=718525
Score = 113 bits (124), Expect = 3e-20
Identities = 162/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| |||||| |||| ||| | ||| ||||| ||||||||||| |||
Sbjct 427260 ATACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCG 427319
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | || |||| || |||||||| || || |||||||| | |||||| || |
Sbjct 427320 GACAAGGTTCTGC-CGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGG 427378
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | ||| ||||| || ||||| ||| || ||| | |||||||| | |||
Sbjct 427379 AGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATGGTGTCCGAAGAT 427436
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
|| || |||| || || ||||| || || | |||||| || ||
Sbjct 427437 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480
>seq1
Length=1828985
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | |||||| | ||||| ||| || || ||||||||||| ||||| ||
Sbjct 1304584 CATACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTC 1304525
Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | | | || | || |||| || || || ||||| ||||| | ||||| ||||
Sbjct 1304524 AGACAAAGTTCTGC-CATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTG 1304466
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | ||||||||| || ||||| ||||| | | || ||||| | ||||
Sbjct 1304465 GTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATT 1304406
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||| ||||| |||||||| || | ||||| || || || |||||
Sbjct 1304405 CCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || ||| | ||||| ||| || || ||||||||||||||||| ||
Sbjct 1304812 CATACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTC 1304753
Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | | | || | || |||| || || || ||||| ||||| | ||||| ||||
Sbjct 1304752 AGACAAAGTTCTGC-CATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTG 1304694
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | ||| ||||| ||| ||||| ||||| | | || ||||| | || |
Sbjct 1304693 GTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACT 1304634
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||| ||||| |||||||| || | ||| ||||| || || |||||
Sbjct 1304633 CCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178
||||| | ||||| ||| || || |||||||| || ||||| || | | | | |
Sbjct 1305027 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTG 1304968
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
| | || |||| || || || ||||| ||||| | ||||| |||| || | ||| ||
Sbjct 1304967 C-CATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTC 1304909
Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
||| || ||||| ||||| | | || ||||| | ||||||||||| | ||
Sbjct 1304908 CTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGT 1304849
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| || | ||| |||||||| || |||||
Sbjct 1304848 GATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990294702808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |