Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 132 3e-26 seq9 113 3e-20 seq1 96.9 2e-15 >seq3 Length=955168 Score = 132 bits (146), Expect = 3e-26 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| ||| | ||||| ||| | ||| ||||| ||||||||||| || | | Sbjct 273711 CCACCTCTCAATCTTAGCACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 273770 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | || |||| |||| |||||| || ||||||||||| | ||| || || | ||| Sbjct 273771 AAAGTTCTGC-CGTCTTCCAACTGCTTACCAGCAAAGATCAATCTCTGTTGGTCAGGAGG 273829 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| ||| ||||| ||| || ||| | |||||||| | || ||| Sbjct 273830 AATACCTTCCTTGTCCTGAATCTTGGACTTGACATTGT--CGATGGTGTCAGAAGACTCC 273887 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || |||||||| || || |||||||| ||||| |||||||| Sbjct 273888 ACCTCAAGGGTGATCGTCTTACCGGTTAGGGTCTTGACGAAAATTTGCAT 273937 >seq9 Length=718525 Score = 113 bits (124), Expect = 3e-20 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| |||||| |||| ||| | ||| ||||| ||||||||||| ||| Sbjct 427260 ATACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAGTCG 427319 Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || |||| || |||||||| || || |||||||| | |||||| || | Sbjct 427320 GACAAGGTTCTGC-CGTCTTCAAGCTGCTTACCAGCGAAGATCAATCTCTGCTGGTCAGG 427378 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 ||| | ||| ||||| || ||||| ||| || ||| | |||||||| | ||| Sbjct 427379 AGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATGGTGTCCGAAGAT 427436 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 || || |||| || || ||||| || || | |||||| || || Sbjct 427437 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 427480 >seq1 Length=1828985 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | |||||| | ||||| ||| || || ||||||||||| ||||| || Sbjct 1304584 CATACCACCGCGCAGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATATTGTAGTC 1304525 Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | | | || | || |||| || || || ||||| ||||| | ||||| |||| Sbjct 1304524 AGACAAAGTTCTGC-CATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTG 1304466 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||||||||| || ||||| ||||| | | || ||||| | |||| Sbjct 1304465 GTGGAATACCTTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCCGAAGATT 1304406 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||| ||||| |||||||| || | ||||| || || || ||||| Sbjct 1304405 CCACTTCCAGAGTAATGGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 1304354 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||| | ||||| ||| || || ||||||||||||||||| || Sbjct 1304812 CATACCACCACGCAATCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTC 1304753 Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | | | || | || |||| || || || ||||| ||||| | ||||| |||| Sbjct 1304752 AGACAAAGTTCTGC-CATCTTCCAATTGTTTTCCCGCAAAAATCAATCTTTGCTGGTCTG 1304694 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 || | ||| ||||| ||| ||||| ||||| | | || ||||| | || | Sbjct 1304693 GTGGAATACCCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGACT 1304634 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||| ||||| |||||||| || | ||| ||||| || || ||||| Sbjct 1304633 CCACTTCCAGAGTAATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 1304582 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178 ||||| | ||||| ||| || || |||||||| || ||||| || | | | | | Sbjct 1305027 AGTCTGAGCACCAAGTGGAGAGTCGATTCCTTTTGTATATTGTAGTCAGACAAAGTTCTG 1304968 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | | || |||| || || || ||||| ||||| | ||||| |||| || | ||| || Sbjct 1304967 C-CATCTTCCAATTGTTTTCCTGCAAAAATCAATCTTTGCTGGTCTGGTGGAATACCCTC 1304909 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| || ||||| ||||| | | || ||||| | ||||||||||| | || Sbjct 1304908 CTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCAGAAGATTCCACCTCTAGAGT 1304849 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| || | ||| |||||||| || ||||| Sbjct 1304848 GATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 1304810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990294702808