Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20lanzarotensis_20[genbank_20GCA_5F000938715.1_202015-01- 21] 24 sequences; 11,092,131 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6 109 7e-19 seq1 84.2 3e-11 >seq6 Length=784318 Score = 109 bits (120), Expect = 7e-19 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 || ||| ||| | | ||| || | ||| ||||| |||||||||| || || |||||| | Sbjct 547142 GTGAAAGTAAGAGTCAGAACTACCAAAGTACCACAAATAGGTGACAAGTTCGCTTCTCGT 547201 Query 63778 ACAGCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAA 63837 | |||||||||||| |||||| | ||||| || ||||||||||| || | Sbjct 547202 CACGGTCAAAAAGGTACTATTGGTATTACGTATCGCAGGGAGGATATGCCTTTCACTGCA 547261 Query 63838 GACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 || ||| | || |||||| | ||||||| |||||||| |||| ||||||||| ||| Sbjct 547262 GAAGGTGTGGTCCCCGATTTGATCATCAACCCACACGCCATTCCTTCTCGTATGACTGTT 547321 >seq1 Length=1828985 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 |||||| | || |||||||| || || |||||||| ||||| || || || | Sbjct 1670149 GGAGATCTGGGTCCTGTTTATGGGTTCCAATGGAGGCATTTCGGTGCAGAATATCGGACG 1670090 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT-T 50593 || || | ||||| || ||||| | || ||| ||||| | ||||| | || | Sbjct 1670089 TGTGATGATGATTACAGTGGACAAGGTTTTGACCAATTGCAAGACGTTATA-CACCGCAT 1670031 Query 50594 GAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGA 50653 |||||||||||| ||||| | ||| | |||| ||| ||||||||| | ||| | | Sbjct 1670030 CAAAACAAACCCCACGGATCGCAGAATTATTATGAGCGCTTGGAATCCACCGGATTTTGC 1669971 Query 50654 TCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCAC 50701 ||| | |||||||| || |||||||| | || || |||| ||| Sbjct 1669970 AAAAATGGCATTACCTCCTTGCCATGTTTTTTCGCATTTCTATGTCAC 1669923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074999877440