Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 seq8 158 1e-33 >seq5 Length=1414338 Score = 250 bits (276), Expect = 3e-61 Identities = 1361/2160 (63%), Gaps = 67/2160 (3%) Strand=Plus/Minus Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 ||||||| | || || ||||| | |||||||| | || || || || |||||||| | Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 | || |||||||| |||| || ||||| ||||||||||| ||||| | | Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 || | || || || || | |||||| || || ||| || | | ||| |||| Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036 |||| | ||||| |||||||| | || |||||||| || || || | || | | Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603 Query 53037 CTTCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093 ||| ||| | ||||| || |||||||| || || ||||| | ||| | Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543 Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGATTAACT 53149 | | || | ||||| | ||| || | | | || | | || || || Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487 Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 | || || || || |||| ||| | |||| ||| || ||| || || || || | | Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 | ||||| || ||||||||||| | ||| ||||| || ||||| || || | || | Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367 Query 53270 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 53329 |||||| | ||| | | | || || | || || ||||| | ||| | || Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCC 53385 | || ||| | |||||| | | |||| | | || Sbjct 886306 GTTGGCTTCTTGTTCCACATGTCAAATTGCAAAATACCTTGCGATGCTGGGG----ACCC 886251 Query 53386 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 53445 || |||| || || |||||||||||| ||||||||| ||| || || | Sbjct 886250 CGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGC 886191 Query 53446 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG 53505 || ||||||||| |||||||| | | || | || | ||||| || ||| || || Sbjct 886190 GTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGG 886131 Query 53506 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565 | | || || || || || || || | |||||||| || | | || |||||||| Sbjct 886130 AATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATG 886071 Query 53566 TCTCTTATTAGAGATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 53623 |||| ||||||| |||| | | ||| | | || ||||| ||| || || ||| | Sbjct 886070 TCTCATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGATGATTCTG 886013 Query 53624 TTGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---- 53676 || | || |||| | ||||| | | || | ||||| ||| | | Sbjct 886012 TTCAAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTTGTACCAT 885956 Query 53677 ------TTGTC--CATC---TATTACAAACA-TGTT--CAATGCAATAGATGCCAGATTA 53722 ||| | |||| | || | | | || | ||| | ||||||||| |||||| Sbjct 885955 TGAGTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTA 885896 Query 53723 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782 || || || ||| || || | || | | |||||| ||| | || | | Sbjct 885895 CAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTTGGAAGAT 885836 Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 |||||| |||||||| | ||| ||| ||| |||| || || || |||||||| ||| Sbjct 885835 TTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATG 885776 Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902 || || |||||||||||| |||| | ||||| || || | ||| | ||||||| Sbjct 885775 AAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACAGTTTCTGAGCCTTG 885716 Query 53903 ATTATAGATTTGTATCTCTTTTCTCTTT--CGTATAGTGTATACAATCGTTCAAACTCGT 53960 || | ||| || | | ||||| |||| | ||| || | ||||| | Sbjct 885715 ATGGTC--TTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCAT 885658 Query 53961 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 54020 | || |||| | ||||||| || || ||| | | ||| | ||| ||||||| Sbjct 885657 CGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGT 885598 Query 54021 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 54080 |||| || | ||||||||| ||||| |||||||| | || || ||||| | || Sbjct 885597 TCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGG 885538 Query 54081 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 54140 | ||| || || || |||||| | ||| | || | | |||||| || | Sbjct 885537 CACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGT 885478 Query 54141 GCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 54200 |||| || ||||| || |||| | | | ||||| | |||||| || || ||||| | | Sbjct 885477 GCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACAT 885418 Query 54201 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGG 54260 | | ||| ||||| ||| |||| | | ||| ||||| | |||||||||| ||| |||| Sbjct 885417 AGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGG 885358 Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTG 54320 | |||| ||| ||| ||| | | | || || ||| | || || || || | Sbjct 885357 TACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGG 885298 Query 54321 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 54380 | | || || || | ||| || ||| || ||||| ||||| ||||| || |||| Sbjct 885297 CAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCAT 885238 Query 54381 CCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAA 54437 || ||||| | | ||||||| ||||| || ||| || | || || || || | Sbjct 885237 CCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTG-CGGC--GTACCAGCGTTGA 885181 Query 54438 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAG 54497 | | ||| || || || |||||||| || | || | ||||||||| |||||||| Sbjct 885180 AAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCA 885121 Query 54498 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 54557 | || |||| | || || || || || |||||||| | | ||| || || | Sbjct 885120 CCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGAC 885061 Query 54558 TTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617 ||| ||| || || ||| ||| | ||| || |||| || || || || | Sbjct 885060 GTTCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGA 885001 Query 54618 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATT 54677 ||||||||||| |||||||| ||||| | || | ||||| || | |||||| | | Sbjct 885000 AATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTTGTGCT 884941 Query 54678 TGTTAACTACATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTA 54733 | || ||| | ||| || ||||| || || || || | || |||||| Sbjct 884940 CTTGCAC--GATC--TCGTACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGTTTTTA 884885 Query 54734 GGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTG 54793 || || || |||| | | ||||| | | || | ||| |||| | || | ||| Sbjct 884884 GGGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCTGCTTG 884825 Query 54794 TGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 54853 || | || || | || ||||| || || | | ||||||||||||| || || || Sbjct 884824 TGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCGTTGT- 884766 Query 54854 CAAGT-GGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912 || || || | ||||||| || | | |||| |||||| || || || || | ||| Sbjct 884765 CATGTACGCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCCTCATA 884706 >seq8 Length=1778692 Score = 158 bits (174), Expect = 1e-33 Identities = 389/581 (67%), Gaps = 12/581 (2%) Strand=Plus/Minus Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184 ||||| ||| || ||||| || ||| | ||| |||||||| | ||| | ||||| || Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622 Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244 ||||||||||||||||| || || |||||| | ||| || |||| |||||| || || Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562 Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAAC-CGGC 24301 || || || | ||||| || || || || || | || | ||| | | ||| | | Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502 Query 24302 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 24359 | ||| || ||||| | ||| ||||| |||||||||| ||||| || || || Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 24360 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 24419 || || ||||| || | | | | || || ||| || || | || ||||| || | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 24420 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 24478 | || | ||| |||| || || ||||| || || || || || |||||||||||| | Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325 Query 24479 AGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 24538 ||||| | ||| || |||||| | || ||| | | |||||| ||||| || || Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265 Query 24539 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 24595 ||| || || |||||||| | ||| || | || | ||| ||| || | Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205 Query 24596 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655 | || ||||| || | | || || || | ||| | || || | ||||| || || Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145 Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 24696 ||||||||| || ||| | |||||| || ||||||| Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATT 705104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721540627840