Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
seq8 158 1e-33
>seq5
Length=1414338
Score = 250 bits (276), Expect = 3e-61
Identities = 1361/2160 (63%), Gaps = 67/2160 (3%)
Strand=Plus/Minus
Query 52797 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856
||||||| | || || ||||| | |||||||| | || || || || |||||||| |
Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783
Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916
| || |||||||| |||| || ||||| ||||||||||| ||||| | |
Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723
Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976
|| | || || || || | |||||| || || ||| || | | ||| ||||
Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663
Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036
|||| | ||||| |||||||| | || |||||||| || || || | || | |
Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603
Query 53037 CTTCTGGAAGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093
||| ||| | ||||| || |||||||| || || ||||| | ||| |
Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543
Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGATTAACT 53149
| | || | ||||| | ||| || | | | || | | || || ||
Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
| || || || || |||| ||| | |||| ||| || ||| || || || || | |
Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
| ||||| || ||||||||||| | ||| ||||| || ||||| || || | || |
Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367
Query 53270 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 53329
|||||| | ||| | | | || || | || || ||||| | ||| | ||
Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307
Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCC 53385
| || ||| | |||||| | | |||| | | ||
Sbjct 886306 GTTGGCTTCTTGTTCCACATGTCAAATTGCAAAATACCTTGCGATGCTGGGG----ACCC 886251
Query 53386 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 53445
|| |||| || || |||||||||||| ||||||||| ||| || || |
Sbjct 886250 CGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGC 886191
Query 53446 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG 53505
|| ||||||||| |||||||| | | || | || | ||||| || ||| || ||
Sbjct 886190 GTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGG 886131
Query 53506 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565
| | || || || || || || || | |||||||| || | | || ||||||||
Sbjct 886130 AATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATG 886071
Query 53566 TCTCTTATTAGAGATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 53623
|||| ||||||| |||| | | ||| | | || ||||| ||| || || ||| |
Sbjct 886070 TCTCATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGATGATTCTG 886013
Query 53624 TTGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---- 53676
|| | || |||| | ||||| | | || | ||||| ||| | |
Sbjct 886012 TTCAAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTTGTACCAT 885956
Query 53677 ------TTGTC--CATC---TATTACAAACA-TGTT--CAATGCAATAGATGCCAGATTA 53722
||| | |||| | || | | | || | ||| | ||||||||| ||||||
Sbjct 885955 TGAGTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTA 885896
Query 53723 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 53782
|| || || ||| || || | || | | |||||| ||| | || | |
Sbjct 885895 CAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTTGGAAGAT 885836
Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842
|||||| |||||||| | ||| ||| ||| |||| || || || |||||||| |||
Sbjct 885835 TTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATG 885776
Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902
|| || |||||||||||| |||| | ||||| || || | ||| | |||||||
Sbjct 885775 AAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACAGTTTCTGAGCCTTG 885716
Query 53903 ATTATAGATTTGTATCTCTTTTCTCTTT--CGTATAGTGTATACAATCGTTCAAACTCGT 53960
|| | ||| || | | ||||| |||| | ||| || | ||||| |
Sbjct 885715 ATGGTC--TTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCAT 885658
Query 53961 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 54020
| || |||| | ||||||| || || ||| | | ||| | ||| |||||||
Sbjct 885657 CGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGT 885598
Query 54021 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 54080
|||| || | ||||||||| ||||| |||||||| | || || ||||| | ||
Sbjct 885597 TCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGG 885538
Query 54081 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 54140
| ||| || || || |||||| | ||| | || | | |||||| || |
Sbjct 885537 CACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGT 885478
Query 54141 GCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 54200
|||| || ||||| || |||| | | | ||||| | |||||| || || ||||| | |
Sbjct 885477 GCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACAT 885418
Query 54201 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGG 54260
| | ||| ||||| ||| |||| | | ||| ||||| | |||||||||| ||| ||||
Sbjct 885417 AGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGG 885358
Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTG 54320
| |||| ||| ||| ||| | | | || || ||| | || || || || |
Sbjct 885357 TACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGG 885298
Query 54321 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 54380
| | || || || | ||| || ||| || ||||| ||||| ||||| || ||||
Sbjct 885297 CAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCAT 885238
Query 54381 CCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAA 54437
|| ||||| | | ||||||| ||||| || ||| || | || || || || |
Sbjct 885237 CCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTG-CGGC--GTACCAGCGTTGA 885181
Query 54438 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAG 54497
| | ||| || || || |||||||| || | || | ||||||||| ||||||||
Sbjct 885180 AAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCA 885121
Query 54498 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 54557
| || |||| | || || || || || |||||||| | | ||| || || |
Sbjct 885120 CCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGAC 885061
Query 54558 TTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 54617
||| ||| || || ||| ||| | ||| || |||| || || || || |
Sbjct 885060 GTTCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGA 885001
Query 54618 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATT 54677
||||||||||| |||||||| ||||| | || | ||||| || | |||||| | |
Sbjct 885000 AATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTTGTGCT 884941
Query 54678 TGTTAACTACATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCATTTTTA 54733
| || ||| | ||| || ||||| || || || || | || ||||||
Sbjct 884940 CTTGCAC--GATC--TCGTACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGTTTTTA 884885
Query 54734 GGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTG 54793
|| || || |||| | | ||||| | | || | ||| |||| | || | |||
Sbjct 884884 GGGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCTGCTTG 884825
Query 54794 TGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTA 54853
|| | || || | || ||||| || || | | ||||||||||||| || || ||
Sbjct 884824 TGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCGTTGT- 884766
Query 54854 CAAGT-GGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912
|| || || | ||||||| || | | |||| |||||| || || || || | |||
Sbjct 884765 CATGTACGCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCCTCATA 884706
>seq8
Length=1778692
Score = 158 bits (174), Expect = 1e-33
Identities = 389/581 (67%), Gaps = 12/581 (2%)
Strand=Plus/Minus
Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184
||||| ||| || ||||| || ||| | ||| |||||||| | ||| | ||||| ||
Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622
Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244
||||||||||||||||| || || |||||| | ||| || |||| |||||| || ||
Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562
Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAAC-CGGC 24301
|| || || | ||||| || || || || || | || | ||| | | ||| | |
Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502
Query 24302 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 24359
| ||| || ||||| | ||| ||||| |||||||||| ||||| || || ||
Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444
Query 24360 TCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA 24419
|| || ||||| || | | | | || || ||| || || | || ||||| || |
Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384
Query 24420 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 24478
| || | ||| |||| || || ||||| || || || || || |||||||||||| |
Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325
Query 24479 AGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 24538
||||| | ||| || |||||| | || ||| | | |||||| ||||| || ||
Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265
Query 24539 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 24595
||| || || |||||||| | ||| || | || | ||| ||| || |
Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205
Query 24596 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655
| || ||||| || | | || || || | ||| | || || | ||||| || ||
Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145
Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 24696
||||||||| || ||| | |||||| || |||||||
Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATT 705104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721540627840
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