Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 208 8e-49 seq6 98.7 1e-15 >seq8 Length=1778692 Score = 208 bits (230), Expect = 8e-49 Identities = 427/630 (68%), Gaps = 11/630 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| ||||| |||||| || ||||||||| | ||||| || |||| | || Sbjct 705055 GAGCCTTTGCTGGTAGAGAACAAACGTCGGTTCGTGTTGTTCCCGATCAAATATCACGAG 705114 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||| ||| ||||||||||||||||| | |||||| | || || Sbjct 705115 ATCTGGCAGGCGTACAAGCGGGCAGAGGCGTCGTTCTGGACGGCAGAGGAGATCGATTTG 705174 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| | ||||||| | || ||||||| |||||||| ||| | Sbjct 705175 TCCAAGGACTTGCACGACTGGAACAACCGTATGAACGAGAACGAGCGGTTCTTCCTTTCA 705234 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | ||||| || |||||||| || ||||| || || ||||| ||||| || || Sbjct 705235 CGTGTGCTTGCGTTTTTCGCTGCTTCGGACGGTATTGTGAACGAAAATCTCGTGGAAAAC 705294 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | || ||||| | | ||||| || |||||||| || |||||| ||| Sbjct 705295 TTCTCCGCAGAAGTGCAAATTCCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATG 705354 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | ||||| |||| ||| ||| |||||||| || ||| | | | || Sbjct 705355 GAGAACATCCACTCCGAAACGTACTCGTTGCTCATCGATACCTACATCAAGGACCCT--- 705411 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||||||| |||||| || || || |||| || || | |||||||||||| Sbjct 705412 AAGGAGAACGAATTTTTGTTCAATGCGATTGAGAACATCCCCCAGATAAAAGAGAAGGCC 705471 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || |||||| | | ||||| | || || || || |||| || || || || || Sbjct 705472 GAATGGGCGATCAGATGGAT-TCAGGACGACGAAGCGTTGTTCGCGGAACGGCTCGTAGC 705530 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| || ||||| || || || || || || || || ||||| || ||| | || Sbjct 705531 GTTCGCCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAA 705590 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 || || || |||||||| || || ||| |||||||| || | ||| ||||| || Sbjct 705591 AAAGAAGGGTCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGACGAAGG 705650 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTT 117198 | |||| ||||| || || ||| |||| Sbjct 705651 TTTGCACACAGACTTCGCGTGCTTGTTGTT 705680 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || ||||| || || |||||| | || || ||| | | Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || || ||||| | |||||| Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||| || || || |||| || | | || | |||||||||| Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 || || ||||| |||| ||||| | || ||| | ||||| || || || Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 1641523 >seq6 Length=1501435 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || || || |||| || ||| | || Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || |||| ||||||||||| ||||| | ||||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | || | ||| ||||||||| |||| || | | ||| | || |||||| Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || || || | || ||||| |||| ||||| ||||| || || Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || || || |||| || ||| | || Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || |||| ||||||||||| ||||| | ||||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | || | ||| ||||||||| |||| || | | ||| | || |||||| Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || || || | || |||| |||| ||||| ||||| || || Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 40688 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747 ||||||| || || || ||||| || ||||| || || || || |||| || ||| || Sbjct 435266 AAATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCT 435207 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 | |||| | | | | | ||| || |||| ||||||||||| ||||| | |||| Sbjct 435206 CTGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACC 435147 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||| || | || | ||| ||||||||| |||| || | | ||| | || |||| Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| || || || | || |||| |||| ||||| |||| || || Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219148478080