Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 132 7e-26 >seq6 Length=1501435 Score = 132 bits (146), Expect = 7e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || || || || || ||| | ||| ||||| | Sbjct 435265 AATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTC 435206 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || |||| | || || ||||| || ||||| ||||| || || || || Sbjct 435205 TGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCA 435146 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | ||||| || || ||||| || || ||| || |||| || ||||| || Sbjct 435145 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 435086 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||||||||||| || || || ||| | |||||||||| Sbjct 435085 CATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGGTAT 435035 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || || || || ||| | ||| ||||| | Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || |||| | || || ||||| || ||||| ||||| || || || ||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || ||||| || || ||| || |||| || ||||| || Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||||||||||| || || || ||||| |||||||||| Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGGTAT 434807 Score = 123 bits (136), Expect = 4e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || ||||| || || || ||||| || || ||||| || |||||||| ||||| || || Sbjct 434411 AAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAG 434352 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || ||||| ||| || ||||||| ||||| || ||||||||||||||||||||||| Sbjct 434351 CAGTTAGAAGATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCAC 434292 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||| | |||||||||| Sbjct 434291 TTAGTCTTGCGTCTGAGAGGTGGTAT 434266 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || || || || ||| | ||| ||||| | Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || |||| | || || ||||| || ||||| ||||| || || || ||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || || ||||| || || ||| || |||| || ||||| || Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||||||||||| |||| || || || ||||| |||| ||| Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGGT 434040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455924454400