Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq8 114 1e-20 seq6 93.3 3e-14 >seq8 Length=1778692 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||| | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | || |||| ||| || || ||||| ||||| | || ||||| || | Sbjct 1641460 AAAGTT--CTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 1641403 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||||||| || || ||| || | | | |||| | || | Sbjct 1641402 GGATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAA 1641343 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||| || ||||| ||||| || ||||| ||||| || ||||| Sbjct 1641342 CCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||| || ||| |||||| || ||||||||||| | Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | || |||| ||| || || || || ||||| | |||||||| |||| Sbjct 71363 AAAGTT--CTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAG 71306 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||||||| || || ||| || | | | |||| | || | Sbjct 71305 GAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGA 71246 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 | |||| || || ||||| || |||| ||||| ||||| Sbjct 71245 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206 >seq6 Length=1501435 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||| | || || |||||||| || || || ||||||||||| || | Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | | || |||| ||||| || ||||| ||||| | |||||||| |||| Sbjct 434101 AAGGTT--CTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAG 434158 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||| |||||| ||| || ||| || | | |||| | || | Sbjct 434159 GGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAA 434218 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||||||||||| ||||| || ||||| || || || ||||| Sbjct 434219 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| | || || ||||||| || || || ||||||||||| || | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | | || |||| ||||| || ||||| ||||| | |||||||| |||| Sbjct 434870 AAGGTT--CTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAG 434927 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||| |||||| ||| || ||| || | | |||| | || | Sbjct 434928 GGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAA 434987 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||||||||||| ||||| || ||||| || || || ||||| Sbjct 434988 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | || || ||||||| || || || ||||||||||| || | Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | | || |||| ||||| || ||||| ||||| | |||||||| |||| Sbjct 435098 AAGGTT--CTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAG 435155 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | |||||| |||||| ||| || ||| || | | | |||| || | Sbjct 435156 GGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAA 435215 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||||||||||| ||||| || || || ||||| || ||||| Sbjct 435216 CCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075161480168