Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 4e-13
seq8 87.8 1e-12
>seq6
Length=1501435
Score = 89.7 bits (98), Expect = 4e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
||||||||||||||||||||||| || | || |||| ||| |||||| || || |||||
Sbjct 434299 GTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATCTTCTAACTGCTTGCCA 434358
Query 18189 GCATAGATAAGTCTTTGTTGATCC 18212
||| ||||||| || || ||||||
Sbjct 434359 GCAAAGATAAGCCTCTGCTGATCC 434382
Score = 86.0 bits (94), Expect = 5e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||| || ||||||||||||||||||||||| || | || ||| ||| ||||||||| ||
Sbjct 434064 GTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTG 434123
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATC 18211
|||||| || | || | ||||||||| ||
Sbjct 434124 TTTGCCAGCGAAAATCAATCTTTGTTGGTC 434153
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
||||||||||||||||||||||| || | || ||| ||| ||||||||| ||||||||
Sbjct 434840 GTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCCA 434899
Query 18189 GCATAGATAAGTCTTTGTTGATC 18211
|| | || | ||||||||| ||
Sbjct 434900 GCGAAAATCAATCTTTGTTGGTC 434922
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
||||||||||||||||||||||| || | || ||| ||| ||||||||| ||||||||
Sbjct 435068 GTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCCA 435127
Query 18189 GCATAGATAAGTCTTTGTTGATC 18211
|| | || | ||||||||| ||
Sbjct 435128 GCGAAAATCAATCTTTGTTGGTC 435150
>seq8
Length=1778692
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || || || ||||| ||||||||||| | || ||| | | |||||||
Sbjct 71405 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 71346
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 71345 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGG 71286
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| | ||| ||| | |||||| | ||
Sbjct 71285 ATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 71226
Query 18297 CCGGTCAATGTTTTTACAAAA 18317
|| ||||| || || ||||||
Sbjct 71225 CCAGTCAAGGTCTTGACAAAA 71205
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||||||||||||||||| || ||| | | |||||||
Sbjct 1641502 ACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATCTTCC 1641443
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||| || || || |||| | |||||| || || || | |||||||| ||
Sbjct 1641442 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTC 1641387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343963013960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |