Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq8 235 5e-57
seq5 228 7e-55
seq6 118 9e-22
>seq8
Length=1778692
Score = 235 bits (260), Expect = 5e-57
Identities = 603/908 (66%), Gaps = 25/908 (3%)
Strand=Plus/Plus
Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593
||| | || || |||| ||||| |||||| || || ||| | |||||| ||||
Sbjct 705079 CGTCGGTTCGTGTTGTTCCCGATCAAATATCACGAGATCTGGCAGGCGTACAAGCGGGCA 705138
Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653
|| || ||||| ||||| | || || | || |||| ||||| || ||| ||| |
Sbjct 705139 GAGGCGTCGTTCTGGACGGCAGAGGAGATCGATTTGTCCAAGGACTTGCACGACTGGAAC 705198
Query 57654 TCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCA 57710
|| | || || ||| | || || || ||| | ||||||||||| ||
Sbjct 705199 AACCGTATGAACGAGAACGAGCGGTTCTTCCTTTCACGTGTGCTTGCGTTTTTCGCTGCT 705258
Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACG 57770
|| || |||||||| ||||| ||| | || |||| || || |||||||||| | |
Sbjct 705259 TCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTCTCCGCAGAAGTGCAAATTCCA 705318
Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830
||||| | ||| || ||||| || || | || || ||| | || || |||| |||
Sbjct 705319 GAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCCGAAACGTAC 705378
Query 57831 TCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTA-GACTGTTCAACGC 57889
||| | ||||||||||| ||| | |||||| | ||| |||| | ||||||| ||
Sbjct 705379 TCGTTGCTCATCGATACCTACATCAAGGACCCTAAGGAG-AACGAATTTTTGTTCAATGC 705437
Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949
||| || | || ||| ||| ||||||| || ||| | |||| |||||| |
Sbjct 705438 GATTGAGAACATCCCCCAGATAAAAGAGAAGGCCGAATGGGCGATCAGATGGATTCAGGA 705497
Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
|| | || |||||| || |||| | ||||||||||| ||||||||| | || ||
Sbjct 705498 CGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTT 705557
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
|| || |||||||| || || ||| |||| || || || |||||||| || ||
Sbjct 705558 CTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCGGACTCAC 705617
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129
||| |||||| | || | | ||||| ||| | || || || || |||||| | |
Sbjct 705618 GTTCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACACAGACTTCGCGTGCTTGTT 705677
Query 58130 GTACTCTCACATTGTCAATAAACCGACGCGGGATCGC---ATCTTGGA---CATTATCAC 58183
|| | ||| ||| | |||| | || |||| | ||| | || || |||||
Sbjct 705678 GTTTGCGCAC-TTG---AAAAAC--AAGCCAGATCCCAAGATCGTCGAACGAATCATCAC 705731
Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243
||||| |||| ||||||||| | ||| ||| || || ||||| | | |||||
Sbjct 705732 GGAGGCTGTCGAGATCGAAAAAAGATACTTCATCGACGCGCTGCCGGTCTCGTTACTCGG 705791
Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGA 58303
||||||| || | ||| |||| | || ||||| || |||||| |||||||
Sbjct 705792 TATGAACGCAGACCTCATGAACCAGTATGTGGAATTTGTCGCTGACAGA---TTGCTCGT 705848
Query 58304 ACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGA 58359
| | ||| ||| | || |||| || ||||| || || |||||| | |
Sbjct 705849 GGCGCTCGGA-AGCCAAAAGGTTTTCAACGTGACCAATCCTTTCGACTTTATGGAAAACA 705907
Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACG 58419
|||| || | |||||||| ||||||||||| |||| ||| ||| || || || ||
Sbjct 705908 TCTCTCTTGCCGGCAAGACCAACTTTTTCGAGAAAAGAGTCTCCGACTACCAGAAGGCCG 705967
Query 58420 GCGTGATG 58427
|||| |||
Sbjct 705968 GCGTCATG 705975
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || ||||| || || || || || |||||| | || |||||| | ||
Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||||||||| | || || ||||||
Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || |||||||| || || |||||||| | ||| || ||| || |||
Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||||| ||||| || || || |||| | ||| |||| || |||
Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGGT 1641521
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || ||||| |||| || || || ||||| | || || ||| | ||||||| |
Sbjct 71205 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 71264
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | ||||| || || |||||||||||| | || || ||||| || | |
Sbjct 71265 TGACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 71324
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || |||||||| | ||| || || || ||||| |||||
Sbjct 71325 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAA 71384
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||| |||| | ||| |||| || ||||
Sbjct 71385 GGAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 71425
>seq5
Length=1414338
Score = 228 bits (252), Expect = 7e-55
Identities = 429/629 (68%), Gaps = 4/629 (1%)
Strand=Plus/Minus
Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411
||||||||||||| || ||||||| || ||| || || ||||| || | || ||||
Sbjct 885582 TCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTT 885523
Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471
| ||| ||||| | ||| | |||||| || | || | ||||| ||||| | |
Sbjct 885522 TACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAAT 885463
Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531
||| |||||| || || ||||| || || || || |||||||| || || || |||||||
Sbjct 885462 AAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGT 885403
Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591
| | || | | ||| || | | || ||||| | ||| || || | |
Sbjct 885402 TAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGG 885343
Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651
| || | | | | |||||||| ||| || || || || ||| | | || || ||||
Sbjct 885342 ATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCA 885283
Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711
| || || | ||||| ||| |||||||| ||||||||| ||| || || | |||||||
Sbjct 885282 TTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCA 885223
Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771
| ||||| || ||||| || | | |||||| | || ||| || || || ||| |
Sbjct 885222 AAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCAT 885163
Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831
||||||| |||| |||||||||||||| || ||||| | ||||| | ||
Sbjct 885162 GCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTC 885103
Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC--CGTGACGCC 23889
||||||| |||| ||| || ||||| | | || ||| || | ||| | | ||| ||
Sbjct 885102 CGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGA--CC 885045
Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949
|| ||| | || || || || || | || ||| || || || ||||||| || | |||
Sbjct 885044 ATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAA 884985
Query 23950 GTCACGATCGTGCACTATGGCCGAATTCA 23978
||| | |||| || |||||||| ||||
Sbjct 884984 GTCTCTGTCGTAGACGATGGCCGAGTTCA 884956
Score = 118 bits (130), Expect = 9e-22
Identities = 279/414 (67%), Gaps = 13/414 (3%)
Strand=Plus/Minus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || | || ||||| ||||||| || || || ||| ||||| |||||| | |
Sbjct 886494 GGTTGACAATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAG 886435
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571
| || ||| |||||||||| |||| || || | || || || || ||||| ||||| |
Sbjct 886434 GCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTA 886375
Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGA-AATTTTACTCTTGAG--CATCGACCAGT 22628
||| ||||| ||||| | || | |||||| ||| || |||||| |||| |||||
Sbjct 886374 GCAGGAGCGAATTTCTGATACCAT-CTTTGACAATCTTGGCCTTGAGGCCATC--CCAGT 886318
Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACT 22686
|||||| |||| ||| || |||| |||||| || ||||||| | || ||||
Sbjct 886317 CCCACAAGTCGGTTGGCTTC---TTGTTCCACATGTCAAATTGCAAAATACCTTGCGAT- 886262
Query 22687 CGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC 22746
|| ||| || | | ||||| || || || | || ||| ||||| |||
Sbjct 886261 -GCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGC 886203
Query 22747 CTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGAC 22806
|||| | ||| ||| || ||||||||||| | ||||||| || || |
Sbjct 886202 AGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTG 886143
Query 22807 GCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860
| ||| | || ||||||| | || ||| || || || | ||| ||||| ||
Sbjct 886142 GGAATCGAAGGGAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCC 886089
>seq6
Length=1501435
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || ||||| || |||| |||||| | |||
Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || | || |||||| || || | || || |||||
Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||||||||||||||||||||| || || || ||||| |||
Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|||||||||||||| ||||| ||
Sbjct 434087 ATTCAAAAAGAATCAACTCTGCA 434065
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || ||||| || |||| |||||| | |||
Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || | || |||||| || || | || || |||||
Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||||||||||||||||||||| || || || ||||| |||
Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857
Query 31373 ATTCAAAAAGAATCGACT 31390
|||||||||||||| |||
Sbjct 434856 ATTCAAAAAGAATCAACT 434839
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || || || || || || || ||||| || |||| |||||| | ||
Sbjct 435264 ATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCT 435205
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || |||||| || || | || || |||||
Sbjct 435204 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 435145
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || ||||||||||||||||||||||| || || || ||||| |||
Sbjct 435144 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 435085
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| ||| | || | || | | ||||| || ||||
Sbjct 435084 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGGTA 435036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766355423360
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