Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 235 5e-57 seq5 228 7e-55 seq6 118 9e-22 >seq8 Length=1778692 Score = 235 bits (260), Expect = 5e-57 Identities = 603/908 (66%), Gaps = 25/908 (3%) Strand=Plus/Plus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||| | || || |||| ||||| |||||| || || ||| | |||||| |||| Sbjct 705079 CGTCGGTTCGTGTTGTTCCCGATCAAATATCACGAGATCTGGCAGGCGTACAAGCGGGCA 705138 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 || || ||||| ||||| | || || | || |||| ||||| || ||| ||| | Sbjct 705139 GAGGCGTCGTTCTGGACGGCAGAGGAGATCGATTTGTCCAAGGACTTGCACGACTGGAAC 705198 Query 57654 TCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCA 57710 || | || || ||| | || || || ||| | ||||||||||| || Sbjct 705199 AACCGTATGAACGAGAACGAGCGGTTCTTCCTTTCACGTGTGCTTGCGTTTTTCGCTGCT 705258 Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACG 57770 || || |||||||| ||||| ||| | || |||| || || |||||||||| | | Sbjct 705259 TCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTCTCCGCAGAAGTGCAAATTCCA 705318 Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830 ||||| | ||| || ||||| || || | || || ||| | || || |||| ||| Sbjct 705319 GAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCCGAAACGTAC 705378 Query 57831 TCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTA-GACTGTTCAACGC 57889 ||| | ||||||||||| ||| | |||||| | ||| |||| | ||||||| || Sbjct 705379 TCGTTGCTCATCGATACCTACATCAAGGACCCTAAGGAG-AACGAATTTTTGTTCAATGC 705437 Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949 ||| || | || ||| ||| ||||||| || ||| | |||| |||||| | Sbjct 705438 GATTGAGAACATCCCCCAGATAAAAGAGAAGGCCGAATGGGCGATCAGATGGATTCAGGA 705497 Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 || | || |||||| || |||| | ||||||||||| ||||||||| | || || Sbjct 705498 CGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTT 705557 Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069 || || |||||||| || || ||| |||| || || || |||||||| || || Sbjct 705558 CTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCGGACTCAC 705617 Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129 ||| |||||| | || | | ||||| ||| | || || || || |||||| | | Sbjct 705618 GTTCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACACAGACTTCGCGTGCTTGTT 705677 Query 58130 GTACTCTCACATTGTCAATAAACCGACGCGGGATCGC---ATCTTGGA---CATTATCAC 58183 || | ||| ||| | |||| | || |||| | ||| | || || ||||| Sbjct 705678 GTTTGCGCAC-TTG---AAAAAC--AAGCCAGATCCCAAGATCGTCGAACGAATCATCAC 705731 Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243 ||||| |||| ||||||||| | ||| ||| || || ||||| | | ||||| Sbjct 705732 GGAGGCTGTCGAGATCGAAAAAAGATACTTCATCGACGCGCTGCCGGTCTCGTTACTCGG 705791 Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGA 58303 ||||||| || | ||| |||| | || ||||| || |||||| ||||||| Sbjct 705792 TATGAACGCAGACCTCATGAACCAGTATGTGGAATTTGTCGCTGACAGA---TTGCTCGT 705848 Query 58304 ACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGA 58359 | | ||| ||| | || |||| || ||||| || || |||||| | | Sbjct 705849 GGCGCTCGGA-AGCCAAAAGGTTTTCAACGTGACCAATCCTTTCGACTTTATGGAAAACA 705907 Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACG 58419 |||| || | |||||||| ||||||||||| |||| ||| ||| || || || || Sbjct 705908 TCTCTCTTGCCGGCAAGACCAACTTTTTCGAGAAAAGAGTCTCCGACTACCAGAAGGCCG 705967 Query 58420 GCGTGATG 58427 |||| ||| Sbjct 705968 GCGTCATG 705975 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || || || || |||||| | || |||||| | || Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| || || |||||||| | ||| || ||| || ||| Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||||| ||||| || || || |||| | ||| |||| || ||| Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGGT 1641521 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 ||| || ||||| |||| || || || ||||| | || || ||| | ||||||| | Sbjct 71205 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 71264 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | ||||| || || |||||||||||| | || || ||||| || | | Sbjct 71265 TGACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 71324 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || ||||| || || |||||||| | ||| || || || ||||| ||||| Sbjct 71325 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAA 71384 Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| |||| | ||| |||| || |||| Sbjct 71385 GGAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTA 71425 >seq5 Length=1414338 Score = 228 bits (252), Expect = 7e-55 Identities = 429/629 (68%), Gaps = 4/629 (1%) Strand=Plus/Minus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 ||||||||||||| || ||||||| || ||| || || ||||| || | || |||| Sbjct 885582 TCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTT 885523 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| ||||| | ||| | |||||| || | || | ||||| ||||| | | Sbjct 885522 TACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAAT 885463 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 ||| |||||| || || ||||| || || || || |||||||| || || || ||||||| Sbjct 885462 AAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGT 885403 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 | | || | | ||| || | | || ||||| | ||| || || | | Sbjct 885402 TAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGG 885343 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | | | | |||||||| ||| || || || || ||| | | || || |||| Sbjct 885342 ATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCA 885283 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || | ||||| ||| |||||||| ||||||||| ||| || || | ||||||| Sbjct 885282 TTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCA 885223 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 | ||||| || ||||| || | | |||||| | || ||| || || || ||| | Sbjct 885222 AAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCAT 885163 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 ||||||| |||| |||||||||||||| || ||||| | ||||| | || Sbjct 885162 GCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTC 885103 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC--CGTGACGCC 23889 ||||||| |||| ||| || ||||| | | || ||| || | ||| | | ||| || Sbjct 885102 CGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGA--CC 885045 Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949 || ||| | || || || || || | || ||| || || || ||||||| || | ||| Sbjct 885044 ATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAA 884985 Query 23950 GTCACGATCGTGCACTATGGCCGAATTCA 23978 ||| | |||| || |||||||| |||| Sbjct 884984 GTCTCTGTCGTAGACGATGGCCGAGTTCA 884956 Score = 118 bits (130), Expect = 9e-22 Identities = 279/414 (67%), Gaps = 13/414 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || | || ||||| ||||||| || || || ||| ||||| |||||| | | Sbjct 886494 GGTTGACAATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAG 886435 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | || ||| |||||||||| |||| || || | || || || || ||||| ||||| | Sbjct 886434 GCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTA 886375 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGA-AATTTTACTCTTGAG--CATCGACCAGT 22628 ||| ||||| ||||| | || | |||||| ||| || |||||| |||| ||||| Sbjct 886374 GCAGGAGCGAATTTCTGATACCAT-CTTTGACAATCTTGGCCTTGAGGCCATC--CCAGT 886318 Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACT 22686 |||||| |||| ||| || |||| |||||| || ||||||| | || |||| Sbjct 886317 CCCACAAGTCGGTTGGCTTC---TTGTTCCACATGTCAAATTGCAAAATACCTTGCGAT- 886262 Query 22687 CGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC 22746 || ||| || | | ||||| || || || | || ||| ||||| ||| Sbjct 886261 -GCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGC 886203 Query 22747 CTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGAC 22806 |||| | ||| ||| || ||||||||||| | ||||||| || || | Sbjct 886202 AGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTG 886143 Query 22807 GCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860 | ||| | || ||||||| | || ||| || || || | ||| ||||| || Sbjct 886142 GGAATCGAAGGGAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCC 886089 >seq6 Length=1501435 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || ||||| || |||| |||||| | ||| Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || |||||| || || | || || ||||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||||||||||||||||||||| || || || ||||| ||| Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 |||||||||||||| ||||| || Sbjct 434087 ATTCAAAAAGAATCAACTCTGCA 434065 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || ||||| || |||| |||||| | ||| Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | || |||||| || || | || || ||||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||||||||||||||||||||| || || || ||||| ||| Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 31373 ATTCAAAAAGAATCGACT 31390 |||||||||||||| ||| Sbjct 434856 ATTCAAAAAGAATCAACT 434839 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || || || || || || ||||| || |||| |||||| | || Sbjct 435264 ATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCT 435205 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||| || || | || || ||||| Sbjct 435204 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 435145 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||||||||||||||||||||| || || || ||||| ||| Sbjct 435144 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 435085 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||| | || | || | | ||||| || |||| Sbjct 435084 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGGTA 435036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360