Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 4e-11 seq5 84.2 4e-11 >seq8 Length=1778692 Score = 84.2 bits (92), Expect = 4e-11 Identities = 166/246 (67%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 35213 GACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAA 35272 || |||||| |||| | ||||| || || ||| | ||| | ||| | ||| | || Sbjct 864554 GATGACACTTTTCCTTTGCTCACGACGAAAAAAGTGTTCATTAAAGGTATCGTGCACGAG 864495 Query 35273 CTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACAC 35332 || | |||||| | || |||||||| || | || | ||||| || Sbjct 864494 CTTTTATGGTTCGTGGCCGGTTGTACAGACGGGAAGAAGTTATCGGAGAAGGGTGTAAGA 864435 Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 || ||| | | |||||||| | || ||||||||||| | ||| | ||||| Sbjct 864434 ATTTGGGAAGGAAATGGGTCTAGAGAGTTTTTGGACAGGCGCGGGCTCACGGATAGGCGT 864375 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 ||||| |||||||||||| |||| || ||||| ||| | ||||||||||| || ||| | Sbjct 864374 GAGGGTGATTTGGGACCCATATATGGGTTCCAGTGGAGACATTTTGGTGCGGAGTATAAA 864315 Query 35453 ACCTGT 35458 || ||| Sbjct 864314 ACTTGT 864309 >seq5 Length=1414338 Score = 84.2 bits (92), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 94186 ATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTG 94245 ||||| || | ||| || ||||||||||| | | ||| ||||| ||||| ||| | Sbjct 885910 ATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAG 885851 Query 94246 CACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTG-ATG-G 94303 ||||| || ||||| ||||||| || | ||| | ||||||||| ||||| ||| ||| | Sbjct 885850 CACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCG 885791 Query 94304 TATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 | | ||||| || |||| || |||||||| Sbjct 885790 TCTTTATAAAG--CATGAAAGGAGTACCAGTTTC 885759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583898567640