Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
seq8 167 3e-36
>seq5
Length=1414338
Score = 250 bits (276), Expect = 3e-61
Identities = 1366/2165 (63%), Gaps = 77/2165 (4%)
Strand=Plus/Minus
Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094
||||||| | || || ||||| | |||||||| | || || || || |||||||| |
Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783
Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154
| || |||||||| |||| || ||||| |||||||| || ||||| | |
Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723
Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214
|| | || || || || | |||||| || || ||| || | | ||| ||||
Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663
Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274
|||| | ||||| |||||||| | || |||||||| || || || | || | |
Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603
Query 62275 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331
||| ||| | ||||| || ||||| || || || ||||| | ||| |
Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543
Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGGTTAACT 62387
| | || | ||||| | ||| || | | | || | | ||||| ||
Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
| ||||| || || |||| ||| | |||| ||| || ||| || || || || |
Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
| ||||| || ||||||||||| | ||| ||||| || ||||| || || | || |
Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367
Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567
|||||| | ||| | | | || || | || || ||||| | ||| | ||
Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307
Query 62568 GACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGT----TACTGGCGT 62616
| || | | ||| | |||| | |||||| | | |||| |
Sbjct 886306 GTTGGCTTCTTGTTCCACATGTC-------AAATTGCAAAATACCTTGCGATGCTGGGG- 886255
Query 62617 ACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTA 62676
| || || |||| ||||| |||||||||||| ||||||| | ||| |
Sbjct 886254 ---ACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCA 886198
Query 62677 ATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTAT 62736
| || ||| ||||||||| || ||||| | | || | || | ||||| || ||
Sbjct 886197 ACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAAT 886138
Query 62737 CAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAG 62796
| || ||| | || || || || || || || | |||||||| || | | || |
Sbjct 886137 CGAAGGGAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTG 886078
Query 62797 GTCTATGTCTCTTATTAGAGATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTAT 62854
||||||||||| ||||||| |||| | | ||| | | || ||||| ||| || ||
Sbjct 886077 GTCTATGTCTCATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGAT 886020
Query 62855 AATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT- 62910
||| | || | ||| |||| | ||||| | | || | ||||| ||| |
Sbjct 886019 GATTCTGTTCAAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTT 885963
Query 62911 ----CA---AATC--GCC--CATC---TATTACAAACA-TGTT--CAATGCAACAGATGC 62953
|| | || ||| |||| | || | | | || | ||| | || ||||||
Sbjct 885962 GTACCATTGAGTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGC 885903
Query 62954 CAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATT 63013
|||||||| || || ||| || || | || | | |||||| ||| | ||
Sbjct 885902 AAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTT 885843
Query 63014 ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 63073
| | ||||| |||||||| | ||| ||| ||| |||| || || || |||||
Sbjct 885842 GGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATA 885783
Query 63074 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC- 63132
||| ||||| ||||||||||||||| |||| | ||||| || || | ||| | | ||
Sbjct 885782 AAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACA-GTTTCT 885724
Query 63133 GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTT--CGTATAGAGTATACAATCGTTC 63190
||||||| || | ||| || | | ||||| |||| | ||| || |
Sbjct 885723 GAGCCTTGATGGTC--TTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCAC 885666
Query 63191 GAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCA 63250
|||||| || || |||| | |||||| || || ||| | | ||| | |||
Sbjct 885665 GAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCA 885606
Query 63251 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63310
||||||| |||| || | ||||||||| ||||| |||||||| | || || ||
Sbjct 885605 GTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAG 885546
Query 63311 ATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63370
||| | | | ||| || || || |||||| | ||| | || | | |||
Sbjct 885545 ATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAAT 885486
Query 63371 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63430
||| || ||||| || ||||| || ||||| | | | ||||| | |||||| || || ||
Sbjct 885485 ATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTG 885426
Query 63431 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63490
||| | || | ||| ||||| ||| |||| | | ||| ||||| | || || ||| |
Sbjct 885425 ATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGT 885366
Query 63491 ACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63550
||| |||||||||| ||| ||| ||| | | | || || ||| | || ||
Sbjct 885365 ACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGAT 885306
Query 63551 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTAT 63610
|| || || | || || || | ||| || ||| || || || ||||| || || ||
Sbjct 885305 ACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGAT 885246
Query 63611 GCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGC 63670
| ||||| ||||| | | ||||||| ||||| || | | | || || ||
Sbjct 885245 GGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGC 885186
Query 63671 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63730
|| || | ||| || || || |||||||| || | || | ||||||||| |||||
Sbjct 885185 GTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTC 885126
Query 63731 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790
|| | || |||| | || || || || || |||||||| | | ||| ||
Sbjct 885125 GATCACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTG 885066
Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850
|| | ||| | | | || ||| |||| | ||| || |||| || || ||
Sbjct 885065 TGGACGTTCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAA 885006
Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| |||||||||||| |||||||| ||||| | || |||| || |||| ||||||
Sbjct 885005 CCCGAAATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTT 884946
Query 63911 ATATTTGTTAACTATATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCAT 63966
| | | || || || ||| || ||||| || || || || | || |
Sbjct 884945 GTGCTCTTGCACGATCTC----GTACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGT 884890
Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 64026
||||||| || || |||| | ||||| | || | ||| |||| | || |
Sbjct 884889 TTTTAGGGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCT 884830
Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTG 64086
|||||| | || || || || ||||| || || | | ||||||||||||| || |
Sbjct 884829 GCTTGTGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCG 884770
Query 64087 TAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64145
| || || || || | |||||||||| | | |||| |||||| || || || ||
Sbjct 884769 TTGT-CATGTACGCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCC 884711
Query 64146 TTATA 64150
| |||
Sbjct 884710 TCATA 884706
>seq8
Length=1778692
Score = 167 bits (184), Expect = 3e-36
Identities = 397/591 (67%), Gaps = 12/591 (2%)
Strand=Plus/Minus
Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631
||||| ||| || ||||| || ||||| ||| |||||||| | ||| | ||||| ||
Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622
Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691
||||||||||||||||| || || |||||| | ||| || |||| || || || ||
Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562
Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGC 33748
|| || || | ||||| || || || || || | || | || | | ||| | |
Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502
Query 33749 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33806
| ||| || ||||| | ||| ||||| |||||||||| ||||| || || |
Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444
Query 33807 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866
|| || ||||| || | | | | || || ||| || || | || |||||||| |
Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384
Query 33867 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925
| || | ||| |||| || || ||||| || || ||||| || |||||||||||| |
Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325
Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985
||||| | ||| |||||||||| | || ||| | | |||||| ||||| || ||
Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265
Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 34042
|| || || |||||||| | ||| || | || | ||| ||| || |
Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205
Query 34043 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102
| || ||||| || | | || || || | ||| | || || | ||||| || ||
Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145
Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 34153
||||||||| || ||| | |||||| || ||||||| ||| |||||
Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATTTGATCGGGAA 705094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817537018240
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