Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 seq8 167 3e-36 >seq5 Length=1414338 Score = 250 bits (276), Expect = 3e-61 Identities = 1366/2165 (63%), Gaps = 77/2165 (4%) Strand=Plus/Minus Query 62035 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094 ||||||| | || || ||||| | |||||||| | || || || || |||||||| | Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783 Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62154 | || |||||||| |||| || ||||| |||||||| || ||||| | | Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723 Query 62155 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62214 || | || || || || | |||||| || || ||| || | | ||| |||| Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663 Query 62215 CCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62274 |||| | ||||| |||||||| | || |||||||| || || || | || | | Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603 Query 62275 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGA 62331 ||| ||| | ||||| || ||||| || || || ||||| | ||| | Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543 Query 62332 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGGTTAACT 62387 | | || | ||||| | ||| || | | | || | | ||||| || Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487 Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 | ||||| || || |||| ||| | |||| ||| || ||| || || || || | Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 | ||||| || ||||||||||| | ||| ||||| || ||||| || || | || | Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367 Query 62508 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567 |||||| | ||| | | | || || | || || ||||| | ||| | || Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307 Query 62568 GACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGT----TACTGGCGT 62616 | || | | ||| | |||| | |||||| | | |||| | Sbjct 886306 GTTGGCTTCTTGTTCCACATGTC-------AAATTGCAAAATACCTTGCGATGCTGGGG- 886255 Query 62617 ACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTA 62676 | || || |||| ||||| |||||||||||| ||||||| | ||| | Sbjct 886254 ---ACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCA 886198 Query 62677 ATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTAT 62736 | || ||| ||||||||| || ||||| | | || | || | ||||| || || Sbjct 886197 ACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAAT 886138 Query 62737 CAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAG 62796 | || ||| | || || || || || || || | |||||||| || | | || | Sbjct 886137 CGAAGGGAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTG 886078 Query 62797 GTCTATGTCTCTTATTAGAGATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTAT 62854 ||||||||||| ||||||| |||| | | ||| | | || ||||| ||| || || Sbjct 886077 GTCTATGTCTCATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGAT 886020 Query 62855 AATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT- 62910 ||| | || | ||| |||| | ||||| | | || | ||||| ||| | Sbjct 886019 GATTCTGTTCAAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTT 885963 Query 62911 ----CA---AATC--GCC--CATC---TATTACAAACA-TGTT--CAATGCAACAGATGC 62953 || | || ||| |||| | || | | | || | ||| | || |||||| Sbjct 885962 GTACCATTGAGTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGC 885903 Query 62954 CAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATT 63013 |||||||| || || ||| || || | || | | |||||| ||| | || Sbjct 885902 AAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTT 885843 Query 63014 ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 63073 | | ||||| |||||||| | ||| ||| ||| |||| || || || ||||| Sbjct 885842 GGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATA 885783 Query 63074 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC- 63132 ||| ||||| ||||||||||||||| |||| | ||||| || || | ||| | | || Sbjct 885782 AAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACA-GTTTCT 885724 Query 63133 GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTT--CGTATAGAGTATACAATCGTTC 63190 ||||||| || | ||| || | | ||||| |||| | ||| || | Sbjct 885723 GAGCCTTGATGGTC--TTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCAC 885666 Query 63191 GAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCA 63250 |||||| || || |||| | |||||| || || ||| | | ||| | ||| Sbjct 885665 GAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCA 885606 Query 63251 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63310 ||||||| |||| || | ||||||||| ||||| |||||||| | || || || Sbjct 885605 GTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAG 885546 Query 63311 ATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63370 ||| | | | ||| || || || |||||| | ||| | || | | ||| Sbjct 885545 ATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAAT 885486 Query 63371 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63430 ||| || ||||| || ||||| || ||||| | | | ||||| | |||||| || || || Sbjct 885485 ATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTG 885426 Query 63431 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63490 ||| | || | ||| ||||| ||| |||| | | ||| ||||| | || || ||| | Sbjct 885425 ATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGT 885366 Query 63491 ACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63550 ||| |||||||||| ||| ||| ||| | | | || || ||| | || || Sbjct 885365 ACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGAT 885306 Query 63551 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTAT 63610 || || || | || || || | ||| || ||| || || || ||||| || || || Sbjct 885305 ACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGAT 885246 Query 63611 GCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGC 63670 | ||||| ||||| | | ||||||| ||||| || | | | || || || Sbjct 885245 GGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGC 885186 Query 63671 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63730 || || | ||| || || || |||||||| || | || | ||||||||| ||||| Sbjct 885185 GTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTC 885126 Query 63731 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790 || | || |||| | || || || || || |||||||| | | ||| || Sbjct 885125 GATCACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTG 885066 Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850 || | ||| | | | || ||| |||| | ||| || |||| || || || Sbjct 885065 TGGACGTTCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAA 885006 Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910 || |||||||||||| |||||||| ||||| | || |||| || |||| |||||| Sbjct 885005 CCCGAAATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTT 884946 Query 63911 ATATTTGTTAACTATATCCATGGTAATACT----TGAAATAATCGGAGAATGTTTCCCAT 63966 | | | || || || ||| || ||||| || || || || | || | Sbjct 884945 GTGCTCTTGCACGATCTC----GTACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGT 884890 Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 64026 ||||||| || || |||| | ||||| | || | ||| |||| | || | Sbjct 884889 TTTTAGGGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCT 884830 Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTG 64086 |||||| | || || || || ||||| || || | | ||||||||||||| || | Sbjct 884829 GCTTGTGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCG 884770 Query 64087 TAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCA 64145 | || || || || | |||||||||| | | |||| |||||| || || || || Sbjct 884769 TTGT-CATGTACGCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCC 884711 Query 64146 TTATA 64150 | ||| Sbjct 884710 TCATA 884706 >seq8 Length=1778692 Score = 167 bits (184), Expect = 3e-36 Identities = 397/591 (67%), Gaps = 12/591 (2%) Strand=Plus/Minus Query 33572 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631 ||||| ||| || ||||| || ||||| ||| |||||||| | ||| | ||||| || Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622 Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691 ||||||||||||||||| || || |||||| | ||| || |||| || || || || Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562 Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGC 33748 || || || | ||||| || || || || || | || | || | | ||| | | Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502 Query 33749 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33806 | ||| || ||||| | ||| ||||| |||||||||| ||||| || || | Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 33807 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866 || || ||||| || | | | | || || ||| || || | || |||||||| | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 33867 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33925 | || | ||| |||| || || ||||| || || ||||| || |||||||||||| | Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325 Query 33926 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985 ||||| | ||| |||||||||| | || ||| | | |||||| ||||| || || Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265 Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 34042 || || || |||||||| | ||| || | || | ||| ||| || | Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205 Query 34043 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102 | || ||||| || | | || || || | ||| | || || | ||||| || || Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145 Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 34153 ||||||||| || ||| | |||||| || ||||||| ||| ||||| Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATTTGATCGGGAA 705094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817537018240