Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=1414338 Score = 107 bits (118), Expect = 2e-18 Identities = 311/479 (65%), Gaps = 0/479 (0%) Strand=Plus/Minus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 |||||||| |||| |||| | | | || ||| ||| | | | || || | || | Sbjct 885640 AATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTC 885581 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTC 38085 ||||| | ||| || | ||||||||||| || | ||| || | |||||| || Sbjct 885580 ATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTA 885521 Query 38086 CCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAA 38145 || |||||| | | || ||| || || ||||| | ||||||||| || | |||| Sbjct 885520 CCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAA 885461 Query 38146 ATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTA 38205 || | | || || |||||||| | ||| || |||| | ||| | | | ||||| ||| Sbjct 885460 ATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGTTA 885401 Query 38206 TATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTA 38265 | | | | |||||| | | ||||| ||| | ||||| |||||| || || | Sbjct 885400 AAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGAT 885341 Query 38266 CCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAA 38325 ||| | | | || || || |||||| || || || ||| || || || | Sbjct 885340 CCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATT 885281 Query 38326 GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATA 38385 || || | ||| || ||||| | ||||| || || ||||||||| || | | | | Sbjct 885280 GCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAA 885221 Query 38386 AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATG 38444 ||||| ||||| ||||| || || || ||||| || | || || || ||||| Sbjct 885220 AAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATG 885162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524753147520