Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 311 1e-79 seq8 185 1e-41 >seq5 Length=1414338 Score = 311 bits (344), Expect = 1e-79 Identities = 1382/2163 (64%), Gaps = 73/2163 (3%) Strand=Plus/Minus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 ||||||| | || || ||||| | |||||||| | || || || || |||||||| | Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || |||||||| |||| || || || |||||||| || ||||| | | Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 || | || || || || | |||||| || || ||| || | | ||| |||| Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946 |||| | ||||| |||||||| | || |||||||| || || || | || | | Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603 Query 78947 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 ||| ||| | ||||| || ||||| || || || | ||||| | ||| | Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGATTAACT 79059 | |||| | ||||| | ||| || | | | || | | || || || Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487 Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 | || || || || |||| ||| | |||| ||| || ||| || || || || | Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||||| || ||||||||||| | ||| |||||||||||||| || || | || | Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367 Query 79180 CTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCA 79239 |||||| | ||| | | || || | || || ||||| ||||| | || Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307 Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTA-GCGTATGATCCTGT 79298 | || ||||| | ||| |||| | |||||| || | | || || || | Sbjct 886306 GTTGGCTTCTTGTTCCACATGTCAAATTGCAAAATACC-TTGCGATGCTGGGGACCCCGC 886248 Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358 |||||||||| ||||||||||| ||||| |||| ||| || | ||| Sbjct 886247 AAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGCGTG 886188 Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418 ||||||||| ||||| || | | || | || | |||||| || ||| || ||| Sbjct 886187 ATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGGAAT 886128 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 | || || || || || || || | |||||||| || | | || ||||||||||| Sbjct 886127 ACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATGTCT 886068 Query 79479 CTTATTAGAAATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 79536 | ||||||| |||| | | ||| | | || ||||| ||| || || ||| | || Sbjct 886067 CATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGATGATTCTGTTC 886010 Query 79537 AGATTCC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC----- 79588 | ||| |||| | ||||| | | || | ||||| ||| | | | Sbjct 886009 AAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTTGTACCATTGA 885953 Query 79589 GTC-------CATC---TATTACAAACA-TGTT--CAACGCGACAGATGCCAGATTACAA 79635 ||| |||| | || | | | || | ||| | | |||||| |||||||| Sbjct 885952 GTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTACAG 885893 Query 79636 ACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTA 79695 || || ||| || || | || | | || ||| ||| | ||| | | || Sbjct 885892 ACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTTGGAAGATTTG 885833 Query 79696 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAC 79755 ||| |||||||| | ||| ||| ||| |||| || || || |||||||| ||||| Sbjct 885832 ATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATGAAA 885773 Query 79756 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 79814 ||||||||||||||| |||| | ||||| || || | ||| | | || ||||||| || Sbjct 885772 GGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACA-GTTTCTGAGCCTTGAT 885714 Query 79815 TATAGACTTGTATCTCTTTTCTCTTT--CGTATTGTGTATATAATCGTTCGAACTCGTCT 79872 | || || | | ||||| |||| | |||||| ||||||| || Sbjct 885713 GGTCT--TTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCATCG 885656 Query 79873 CCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCA 79932 || |||| || | ||||| || ||| ||| | | ||| | ||| ||||| | Sbjct 885655 CCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGTTC 885596 Query 79933 TCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 79992 |||| || | ||||||||| ||||| |||||||| | || || ||||| | || Sbjct 885595 TCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCA 885536 Query 79993 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 80052 | || || || || |||||| | ||| | || | | |||||| || ||| Sbjct 885535 CGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGC 885476 Query 80053 CACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTAT 80112 || || ||||| || ||||| | | | || |||| |||||| || || ||||| | || Sbjct 885475 CATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAG 885416 Query 80113 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 80172 | ||| ||||| ||| |||| | | ||| ||||| | |||||||||||||| ||||| Sbjct 885415 CGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTA 885356 Query 80173 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 80232 |||| ||| ||| ||| | | | || || ||| | || || || || || Sbjct 885355 CCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCA 885296 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 | || || || | ||| || ||| || ||||| ||||| ||||| ||| ||||| Sbjct 885295 GTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCC 885236 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAAAT 80349 ||||| | | ||||||| ||||| || ||| || | || || || || || Sbjct 885235 TTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTG-CGGC--GTACCAGCGTTGAAA 885179 Query 80350 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 80409 | ||| || || || |||||||| || | |||| ||||||||| ||||| || | Sbjct 885178 AGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACC 885119 Query 80410 GATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTT 80469 ||| |||| | || || || || || |||||||| | | ||| || || | | Sbjct 885118 TTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGT 885059 Query 80470 TCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAA 80529 || ||| || ||| ||| |||| | ||| || |||| || || || || ||| Sbjct 885058 TCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAA 884999 Query 80530 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 80589 ||||||||| |||||||| ||||| | || ||||||| || | |||||| | | Sbjct 884998 TAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTTGTGCTCT 884939 Query 80590 TTAACTACATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTTAG 80644 | || ||| | || | || | ||||| || || || || | || ||||||| Sbjct 884938 TGCAC--GATC--TCGT-ACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGTTTTTAG 884884 Query 80645 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 80704 | || || |||| | ||||| | || | ||| |||| | || | ||||| Sbjct 884883 GGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCTGCTTGT 884824 Query 80705 GTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATC----TGGAT-GTTGTGT 80759 | | || || | || ||||| || || ||| |||||||||| ||||| ||||| Sbjct 884823 GCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCGTTGTCA 884764 Query 80760 AGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATT 80819 |||| || | |||||||||| | | |||| |||||| || || || || | Sbjct 884763 TGTAC-----GCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCCTC 884709 Query 80820 ATA 80822 ||| Sbjct 884708 ATA 884706 >seq8 Length=1778692 Score = 185 bits (204), Expect = 1e-41 Identities = 401/591 (68%), Gaps = 12/591 (2%) Strand=Plus/Minus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||| ||| || ||||| || ||||| ||| |||||||| | ||| || ||||| || Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 ||||||||||||||||| || || |||||| | ||| || |||| |||||| || || Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAAC-TGGC 50126 || || || | ||||| || ||||| || || || || | || | | ||| | Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502 Query 50127 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184 | ||| || ||||| | ||| ||||| |||||||||| ||||| || || | Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 50244 || || ||||| || | | | | || || ||| || || | || |||||||| | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 50245 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || | ||| |||| || || ||||| || || ||||| || |||||||||||| | Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| |||||||||| | || ||| | | |||||| ||||| || || Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTT 50421 ||| || || |||||||| | ||| || | || |||| | | | | Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205 Query 50422 A-GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | | || ||||| || | | || || || | ||| | || || | ||||| || || Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 ||||||||| || ||| | |||||| || ||||||| ||| ||||| Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATTTGATCGGGAA 705094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120