Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 237 2e-57 seq8 165 1e-35 >seq5 Length=1414338 Score = 237 bits (262), Expect = 2e-57 Identities = 796/1228 (65%), Gaps = 32/1228 (3%) Strand=Plus/Minus Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAAT 71753 ||| | || |||||| |||||||| || || ||| || || | || | | ||| Sbjct 885917 CAAAGAAATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAAT 885858 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 ||| ||| | || | | |||||| |||||||| | ||| ||| ||| |||| Sbjct 885857 CTCACAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTT 885798 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 || || || |||||||| || || ||||||||||||||| |||| | ||||| || || Sbjct 885797 GCATGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGC 885738 Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTT--CGTATTG 71930 | ||| | | || ||||||| || | || | || | | ||||| |||| | Sbjct 885737 GTACCACA-GTTTCTGAGCCTTGATGGTCTT--TCTACCGCGACCCTCTTGAACGTAACG 885681 Query 71931 TGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGG 71990 |||||| ||||||| || || || | | | ||||| || || | || Sbjct 885680 CTCATATAAAGCCACGAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGG 885621 Query 71991 ACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCA 72050 | | | ||| | ||| ||||| | || | || | ||||||||| ||||| |||||||| Sbjct 885620 AGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCA 885561 Query 72051 AAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 72110 | || || ||||| | || | || || || || |||||| | ||| Sbjct 885560 TAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATC 885501 Query 72111 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCG 72170 | || | | |||||| || ||||| || ||||| || ||||| | | | || || | Sbjct 885500 TATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCT 885441 Query 72171 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 72230 |||||| || || ||||| | || | ||| ||||| ||| |||| | | ||| ||||| Sbjct 885440 TTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAAT 885381 Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 | |||||||||| ||| ||||| |||| ||| ||| ||| | | | || ||| Sbjct 885380 CAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTG 885321 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 ||| | || || || || || | || || || | ||| || ||| || ||||| Sbjct 885320 AATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATC 885261 Query 72351 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG--- 72407 ||||| ||||| || |||||| ||||| | | ||||||| ||||| || Sbjct 885260 GTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGG 885201 Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467 ||| || | || || || || || | ||| || || || |||||||| || | || Sbjct 885200 GTG-CGGC--GTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGA 885144 Query 72468 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527 || ||||||||| ||||| || | ||| |||| | ||||| || || || || Sbjct 885143 CATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAAC 885084 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587 |||||| | | || || || | ||| ||| || ||| ||| |||| | ||| || Sbjct 885083 ACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACCATTGATTCTCAATAGGTACGA 885024 Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647 |||| || || || || |||||||||||| |||||||| ||||| | || | Sbjct 885023 GCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGC 884964 Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-----GAAATA 72702 ||| || || | |||||| | | | || || || || | || | ||||| Sbjct 884963 CGAGTTCAGCTCATCCTTGTGCTCTTGCACGATCTC----GT-ACACCTCCTGGGAAATC 884909 Query 72703 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 72762 || || || || | || |||||||| || || |||| | ||||| | || | Sbjct 884908 ATAGGCGAGTGAATTCCGTTTTTAGGGTTCACGTAGTGATACAAATCGCTTACTACCTGG 884849 Query 72763 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 72822 ||| |||| | || | |||||| | || || | || ||||| || || | | || Sbjct 884848 GAAAACTGTTTCGTGGTCTGCTTGTGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTG 884789 Query 72823 GCATAATC----TGGAT-GTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGT 72877 |||||||| ||||| ||||| |||| || | || ||||||| | | | Sbjct 884788 GCATAATCCGGGTGGATCGTTGTCATGTAC-----GCGCACGTCTCGGCTGCCAAATTAT 884734 Query 72878 CCAATTCTACCGTTGTTACTCCATTATA 72905 ||| |||||| || || || || | ||| Sbjct 884733 CCAGTTCTACGGTCGTAACACCCTCATA 884706 Score = 123 bits (136), Expect = 3e-23 Identities = 328/497 (66%), Gaps = 13/497 (3%) Strand=Plus/Minus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 ||||||| | ||||||||||| | | |||||| |||| || || || |||||||| | Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT-GGAATAGCTA 70908 |||| |||||||| |||| || ||||| |||||||| || ||||| || | || Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCG-TA 886724 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 ||| || |||||||| || | || || || || ||| || | | ||| ||| Sbjct 886723 GGAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCA 886664 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | ||||| |||||||| | || |||||||| || || || | || | Sbjct 886663 GCCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGC 886604 Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 |||| ||| | ||||| || ||||| || || || | |||||| | || Sbjct 886603 TCTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTC 886544 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGAGGATTAAC 71141 || |||| | ||||| | ||| || | | | || | | || || || Sbjct 886543 ATGGCTTCGTCCCATA----CACCAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGAC 886488 Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 | || || || || |||| ||| | ||||| ||| || ||| || || || || | Sbjct 886487 AATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAA 886428 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 | ||||| || ||||||||||| | ||| ||||| || ||||| || || | || || Sbjct 886427 ACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAG 886368 Query 71262 ACTATTTCTAAGACCAT 71278 |||||| | ||||| Sbjct 886367 CGAATTTCTGATACCAT 886351 >seq8 Length=1778692 Score = 165 bits (182), Expect = 1e-35 Identities = 397/592 (67%), Gaps = 14/592 (2%) Strand=Plus/Minus Query 42055 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGA 42114 ||||| ||| || ||||| || ||||| ||| || ||||| | ||| | ||||| || Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622 Query 42115 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCC 42174 ||||||||||||||||| || || |||||| | ||| || || | |||||| || || Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562 Query 42175 AGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGC 42231 || || || | ||||| || || || || || | || | || | | ||| | | Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502 Query 42232 ACTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 42289 ||| || ||||| | ||| ||||| |||||||||| ||||| || || | Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 42290 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAA 42349 || || ||||| || | | | | || || ||| || || | || |||||||| | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 42350 AGACTA-TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 42408 | || | ||| |||| || || ||||| || || ||||| || |||||||||||| | Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325 Query 42409 GGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCC 42468 |||||| | || || ||||||| | || ||| | | |||||||||||| || || Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265 Query 42469 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA 42528 ||| || || |||||||| | ||| || | || | |||| | ||| | Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTC-TCGTTCA 705206 Query 42529 T----TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATG 42584 | || ||||| || | | || || || | ||| | || ||| ||||||| || | Sbjct 705205 TACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACG 705146 Query 42585 ATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAA 42636 | || |||||| || ||| | |||||| || ||||||| || ||||| Sbjct 705145 ACGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATTTGATCGGGAA 705094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139132886080