Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 1e-20
seq6 96.9 4e-15
>seq8
Length=1778692
Score = 114 bits (126), Expect = 1e-20
Identities = 293/439 (67%), Gaps = 19/439 (4%)
Strand=Plus/Plus
Query 50407 TTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTT 50466
|| || ||||| | || ||||| ||| || |||||||||||||| || ||| |||
Sbjct 705511 TTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTT 705570
Query 50467 GCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 50526
|| ||||| || | | |||| || | |||||||| |||||||| ||||||
Sbjct 705571 GCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCGGACTCACGTTCTCGAACGAG 705630
Query 50527 TTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGCGC 50586
| |||| | |||||||| ||||||||||||| ||||| |||| | ||
Sbjct 705631 CTTATTTGCAGAGACGAAGGTTTGCACACAGACTTCGCGTGCTTGT-------TGTTTGC 705683
Query 50587 GTAAATGAAAAATTA-TCATA-CGAAACAATTTTGGAC--ATGTTCAAAGAAGCCGTCGA 50642
| | ||||||| | || | | || | | | || || ||| || || |||||
Sbjct 705684 GCACTTGAAAAACAAGCCAGATCCCAAGATCGTCGAACGAATCATCACGGAGGCTGTCGA 705743
Query 50643 CATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGA 50702
||||||||| | |||| ||||| | || || | || | || |||||||||||
Sbjct 705744 GATCGAAAAAAGATACTTCATCGACGCGCTGCCGGTCTCGTTACTCGGTATGAACGCAGA 705803
Query 50703 CATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACC 50762
| | ||| | |||| | || ||||| || ||||||||| | || ||| ||| | ||
Sbjct 705804 CCTCATGAACCAGTATGTGGAATTTGTCGCTGACAGATTGCTCGTGGCGCTCGGA-AGCC 705862
Query 50763 GAAATACTATAATGCACGTAACC---CCTTTC-CGTTTATGAATAACATATCGTTGGAGG 50818
||| | | | |||| ||| |||||| |||||| | ||||| || | | |
Sbjct 705863 AAAAGGTTTTCA---ACGTGACCAATCCTTTCGACTTTATGGAAAACATCTCTCTTGCCG 705919
Query 50819 GCAAAACAAACTTTTTCGA 50837
|||| || |||||||||||
Sbjct 705920 GCAAGACCAACTTTTTCGA 705938
>seq6
Length=1501435
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| |||||||| ||||| || | || ||||||||||| ||||||||||| |
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||| ||||| | |||| | ||| || || |||||
Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||| || || | | || | ||||| | | ||| ||
Sbjct 434161 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACC 434220
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | |||||| || || | || || ||||| || ||||||
Sbjct 434221 TCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 434268
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| |||||||| ||||| || | || ||||||||||| ||||||||||| |
Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||| ||||| | |||| | ||| || || |||||
Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||| || || | | || | ||||| | | ||| ||
Sbjct 434930 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACC 434989
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | |||||| || || | || || ||||| || ||||||
Sbjct 434990 TCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 435037
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| | |||||| ||||| || | || ||||||||||| ||||||||||| |
Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||||| ||||| | |||| | ||| || || |||||
Sbjct 435098 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 435157
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||| || || | | || | ||||| | || ||| ||
Sbjct 435158 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACC 435217
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| || || | ||||| || || || |||||
Sbjct 435218 TCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| | |||||| ||||| || | || ||||||||||| ||||||||||| |
Sbjct 434269 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGAC 434328
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| || ||||| | || || |||||| |||| || | |||||||| |||||
Sbjct 434329 AATGTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 434388
Query 143078 ATGCCTTCTTTGTC 143091
|| || || |||||
Sbjct 434389 ATACCCTCCTTGTC 434402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014349298560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |