Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq8 150 2e-31
>seq8
Length=1778692
Score = 150 bits (166), Expect = 2e-31
Identities = 467/714 (65%), Gaps = 14/714 (2%)
Strand=Plus/Minus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
|||||||| || |||||||| || || || | | || || ||||||||||| ||||||
Sbjct 705947 ACTCTTTTCTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTTTTCCATAAAGTCGAAA 705888
Query 12935 GGATTTTTCGAACAATAGTAT--TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAA 12992
||||| || || | | |||| | || | | | | |||||||||||| |
Sbjct 705887 GGATTGGTC--ACGTTGAAAACCTTTTGGCTTCCGAGCGCCACGAGCAATCTGTCAGCGA 705830
Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052
|||| || | ||||| ||||| | || |||||| || | ||| || |||| |
Sbjct 705829 CAAATTCCACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTAACGAGACCGGCAGCG 705770
Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112
| || | || | ||||||| || || || || || | | || || | |||
Sbjct 705769 CGTCGATGAAGTATCTTTTTTCGATCTCGACAGCCTCCGTGATGAT---TCGTTCGACGA 705713
Query 13113 TCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATACATGCAAAATCACAGTGCA 13169
||| ||| ||| | ||| ||||| || || || || || |||||
Sbjct 705712 TCTTGGGATCTGGCTTGTTTTTCAAGTGCGCAAACAACAAGCACGCGAAGTCTGTGTGCA 705653
Query 13170 ATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAG-CCCTCGT 13228
| ||||| ||||| | || |||||||| || || || || || |||||||| |||| |
Sbjct 705652 AACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAGTCCGGGCATAAGACCCTTCT 705593
Query 13229 TTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCA 13288
|||| || ||| || || || ||||||||||| || ||||| | ||||| || || ||
Sbjct 705592 TTTTCAA-CCAGAAAATGGCCGCAAACGAACCTGAGAAAAACACACCTTCGACAGCGGCG 705534
Query 13289 AACGCTATCAACCTTTCACCATACGTACTATTTTTACT-CTCTATCCACTTTCTGGCCCA 13347
||||||| | || ||| | || || || | | || ||||| | | |||||
Sbjct 705533 AACGCTACGAGCCGTTCCGCGAAC-AACGCTTCGTCGTCCTGAATCCATCTGATCGCCCA 705475
Query 13348 GTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttC 13407
| || || | ||| | | || || || || || || || ||| | | || ||
Sbjct 705474 TTCGGCCTTCTCTTTTATCTGGGGGATGTTCTCAATCGCATTGAACAAAAATTCGTTCTC 705415
Query 13408 CTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTC 13467
|||| ||| || || ||||| || | || ||| |||| || || || || ||
Sbjct 705414 CTTAGGGTCCTTGATGTAGGTATCGATGAGCAACGAGTACGTTTCGGAGTGGATGTTCTC 705355
Query 13468 CATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAA 13527
|||| || ||||| || || |||||| | ||||||| | || ||||| | | | ||
Sbjct 705354 CATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGAATTTGCACTTCTGCGGAGAA 705295
Query 13528 TCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG 13581
|||| | | |||||||| || || ||||| |||||| ||||| |||||
Sbjct 705294 GTTTTCCACGAGATTTTCGTTCACAATACCGTCCGAAGCAGCGAAAAACGCAAG 705241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982357979216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |