Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6 152 1e-31 seq8 134 3e-26 >seq6 Length=1501435 Score = 152 bits (168), Expect = 1e-31 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | |||| || || || |||||||| ||||| || || || Sbjct 435035 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 435094 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||||||| ||||| | ||||| ||||| ||||| | || ||||| || ||| Sbjct 435095 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 435154 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| ||||||||||| | || ||||| || | ||| || | ||| Sbjct 435155 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCA 435214 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 ||||| || ||||| ||||| || ||||| ||||| ||||| |||||||||| Sbjct 435215 ACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| || || || |||||||| ||||| || || || || | |||||||| ||||| Sbjct 434828 ACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCC 434887 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||| ||||| ||||| | || ||||| || ||||| || || ||||| |||||| Sbjct 434888 AACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGA 434947 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| | || ||||| || | || ||| || ||| ||||| || ||||| ||||| Sbjct 434948 ATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTT 435007 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || |||||||| Sbjct 435008 CCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| ||||| || || || || | |||||||| ||||| | ||||| ||| Sbjct 434071 GTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCCA 434130 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | || ||||| || ||||| || || ||||| ||||||||||| | || Sbjct 434131 GCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTC 434190 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || ||| || ||| ||||| || ||||| ||||| || || || || Sbjct 434191 ACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTC 434250 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 434251 TTGACGAAAATCTGCAT 434267 Score = 114 bits (126), Expect = 3e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | |||| || || || |||||||| ||||| || || ||| Sbjct 434266 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCA 434325 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | |||||||| ||||||| || || |||||||| || |||||||| ||||| ||| Sbjct 434326 GACAATGTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGA 434385 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490 || || || || || ||||||||||| | || ||||| || Sbjct 434386 GGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATC 434426 >seq8 Length=1778692 Score = 134 bits (148), Expect = 3e-26 Identities = 298/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Plus Query 268856 CTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGT 268915 ||||||||||| || | | || ||||| || ||||||||||| || || || |||| Sbjct 705241 CTTGCGTTTTTCGCTGCTTCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTCTCC 705300 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 ||| || || ||||| || |||| |||||| ||||| |||||||| || || || Sbjct 705301 GCAGAAGTGCAAATTCCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAGAAC 705360 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAG 269035 || || || || | |||| | | || ||||| || || | || || || || Sbjct 705361 ATCCACTCCGAAACGTACTCGTTGCTCATCGATACCTACATCAAGGACCCTAAGGAGAAC 705420 Query 269036 AAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGC 269094 || | || | | || |||||| || | | | | | || | |||||||| Sbjct 705421 GAATTTTTGTTCAATGCGATTGAGAAC-ATCCCCCAGATAAAAGAGAAGGCCGAATGGGC 705479 Query 269095 TCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGC 269151 | | |||||| | || || || || || ||| || | || || || ||||| Sbjct 705480 GATCAGATGGATTCAGGACGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCGCCGC 705539 Query 269152 TGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGG 269211 ||| |||||| | || || || || || ||||| || || || |||||||| || | || Sbjct 705540 TGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGG 705599 Query 269212 CCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTG 269271 |||||||| ||| | || ||||| ||||| | || |||| ||||||||||| ||| Sbjct 705600 TCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACAC 705659 Query 269272 CGACTTCGCTTGTTTATTATTT 269293 |||||||| || || || ||| Sbjct 705660 AGACTTCGCGTGCTTGTTGTTT 705681 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || ||||| || ||||| || | |||||| || ||||| | ||| || ||| Sbjct 1641490 GTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATCTTCCAATTGCTTACCA 1641431 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | || || || ||||| || || ||||| || ||||| ||||| | || Sbjct 1641430 GCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGGATCTTGGACTTG 1641371 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || ||| ||||||| || ||||||||||| ||||| || Sbjct 1641370 ACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGTCTTACCCGTAAGGGTC 1641311 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1641310 TTGACAAAAATCTGCAT 1641294 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| | |||||| || ||||| | ||| || ||| Sbjct 71393 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 71334 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | || ||||| |||||||| || ||||| || ||||| ||||| | || Sbjct 71333 GCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTG 71274 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| || ||| || || | || || ||||||||||| | || Sbjct 71273 ACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 71214 Query 104543 TTTACAAA 104550 || ||||| Sbjct 71213 TTGACAAA 71206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398281981664