Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 152 1e-31
seq8 134 3e-26
>seq6
Length=1501435
Score = 152 bits (168), Expect = 1e-31
Identities = 173/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | | |||| || || || |||||||| ||||| || || ||
Sbjct 435035 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 435094
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||| ||||| | ||||| ||||| ||||| | || ||||| || |||
Sbjct 435095 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 435154
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || ||||| ||||||||||| | || ||||| || | ||| || | |||
Sbjct 435155 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCA 435214
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561
||||| || ||||| ||||| || ||||| ||||| ||||| ||||||||||
Sbjct 435215 ACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||| || || || |||||||| ||||| || || || || | |||||||| |||||
Sbjct 434828 ACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCC 434887
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
| ||||| ||||| ||||| | || ||||| || ||||| || || ||||| ||||||
Sbjct 434888 AACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGA 434947
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| | || ||||| || | || ||| || ||| ||||| || ||||| |||||
Sbjct 434948 ATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTT 435007
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || || ||||||||
Sbjct 435008 CCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||| ||||| || || || || | |||||||| ||||| | ||||| |||
Sbjct 434071 GTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCCA 434130
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | || ||||| || ||||| || || ||||| ||||||||||| | ||
Sbjct 434131 GCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTC 434190
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||| || ||| ||||| || ||||| ||||| || || || ||
Sbjct 434191 ACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTC 434250
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 434251 TTGACGAAAATCTGCAT 434267
Score = 114 bits (126), Expect = 3e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | | |||| || || || |||||||| ||||| || || |||
Sbjct 434266 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCA 434325
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||| ||||||| || || |||||||| || |||||||| ||||| |||
Sbjct 434326 GACAATGTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGA 434385
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490
|| || || || || ||||||||||| | || ||||| ||
Sbjct 434386 GGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATC 434426
>seq8
Length=1778692
Score = 134 bits (148), Expect = 3e-26
Identities = 298/442 (67%), Gaps = 5/442 (1%)
Strand=Plus/Plus
Query 268856 CTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGT 268915
||||||||||| || | | || ||||| || ||||||||||| || || || ||||
Sbjct 705241 CTTGCGTTTTTCGCTGCTTCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTCTCC 705300
Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975
||| || || ||||| || |||| |||||| ||||| |||||||| || || ||
Sbjct 705301 GCAGAAGTGCAAATTCCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAGAAC 705360
Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAG 269035
|| || || || | |||| | | || ||||| || || | || || || ||
Sbjct 705361 ATCCACTCCGAAACGTACTCGTTGCTCATCGATACCTACATCAAGGACCCTAAGGAGAAC 705420
Query 269036 AAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGC 269094
|| | || | | || |||||| || | | | | | || | ||||||||
Sbjct 705421 GAATTTTTGTTCAATGCGATTGAGAAC-ATCCCCCAGATAAAAGAGAAGGCCGAATGGGC 705479
Query 269095 TCTGAAATGGATAAACGATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGC 269151
| | |||||| | || || || || || ||| || | || || || |||||
Sbjct 705480 GATCAGATGGATTCAGGACGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCGCCGC 705539
Query 269152 TGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGG 269211
||| |||||| | || || || || || ||||| || || || |||||||| || | ||
Sbjct 705540 TGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGG 705599
Query 269212 CCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTG 269271
|||||||| ||| | || ||||| ||||| | || |||| ||||||||||| |||
Sbjct 705600 TCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACAC 705659
Query 269272 CGACTTCGCTTGTTTATTATTT 269293
|||||||| || || || |||
Sbjct 705660 AGACTTCGCGTGCTTGTTGTTT 705681
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || ||||| || ||||| || | |||||| || ||||| | ||| || |||
Sbjct 1641490 GTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATCTTCCAATTGCTTACCA 1641431
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | || || || ||||| || || ||||| || ||||| ||||| | ||
Sbjct 1641430 GCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGGATCTTGGACTTG 1641371
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || ||| ||||||| || ||||||||||| ||||| ||
Sbjct 1641370 ACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGTCTTACCCGTAAGGGTC 1641311
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 1641310 TTGACAAAAATCTGCAT 1641294
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || || || || |||||||| | |||||| || ||||| | ||| || |||
Sbjct 71393 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCA 71334
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || ||||| |||||||| || ||||| || ||||| ||||| | ||
Sbjct 71333 GCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTG 71274
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || | || || ||||||||||| | ||
Sbjct 71273 ACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTC 71214
Query 104543 TTTACAAA 104550
|| |||||
Sbjct 71213 TTGACAAA 71206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398281981664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |