Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 262 5e-65 seq8 170 2e-37 >seq5 Length=1414338 Score = 262 bits (290), Expect = 5e-65 Identities = 1368/2162 (63%), Gaps = 71/2162 (3%) Strand=Plus/Minus Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 ||||||| | || || ||||| | |||||||| | || || || || |||||||| | Sbjct 886842 CCTTGTCTATCGTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATAC 886783 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 | || |||||||| |||| || ||||| |||||||| || ||||| | | Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 || | || || || || | |||||| || || ||| || | | ||| |||| Sbjct 886722 GAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAG 886663 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223 |||| | ||||| |||||||| | || |||||||| || || || | || | | Sbjct 886662 CCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCT 886603 Query 62224 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 ||| ||| | ||||| || ||||| || || || | ||||| | ||| | Sbjct 886602 CTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCA 886543 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAA----CTCTAAGGAGATGCGGATTAACT 62336 | | || | ||||| | ||| || | | | || | | || || || Sbjct 886542 TGGCTTCGTCCCATACAC----CAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487 Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 | || || || || |||| ||| | |||| ||| || ||| || || || || | Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 | ||||| || ||||||||||| | ||| ||||| || ||||| || || | || | Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367 Query 62457 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62516 |||||| | ||| | | | || || | || || ||||| | ||| | || Sbjct 886366 GAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCG 886307 Query 62517 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCC 62572 | || ||| | |||||| | | |||| | | || Sbjct 886306 GTTGGCTTCTTGTTCCACATGTCAAATTGCAAAATACCTTGCGATGCTGGGG----ACCC 886251 Query 62573 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 62632 || |||| || || |||||||||||| ||||||||| ||| || || | Sbjct 886250 CGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGC 886191 Query 62633 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG 62692 || ||||||||| |||||||| | | || | || | ||||| || ||| || || Sbjct 886190 GTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGG 886131 Query 62693 ATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62752 | | || || || || || || || | |||||||| || | | || |||||||| Sbjct 886130 AATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATG 886071 Query 62753 TCTCTTATTAGAGATTTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62810 |||| ||||||| |||| | | ||| | | || ||||| ||| || || ||| | Sbjct 886070 TCTCATATTAGAT-TTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGATGATTCTG 886013 Query 62811 TTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CA- 62861 || | ||| |||| | ||||| | | || | ||||| ||| | || Sbjct 886012 TTCAAATTGTAAGTGACGAC--CTTTG-CAATCTCATGAAGTTTCTCAAAGTTGTACCAT 885956 Query 62862 --AATC--GCC--CATC---TATTACAAACA-TGTT--CAAGGCAACAGATGCCAGATTA 62909 | || ||| |||| | || | | | || | ||| | || |||||| |||||| Sbjct 885955 TGAGTCTTGCCGTCATCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTA 885896 Query 62910 CAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 62969 || || || ||| || || | || | | |||||| ||| | || | | Sbjct 885895 CAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTTGGAAGAT 885836 Query 62970 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63029 ||||| |||||||| | ||| ||| ||| |||| || || || |||||||| ||| Sbjct 885835 TTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATG 885776 Query 63030 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTT 63088 || ||||||||||||||| |||| | ||||| || || | ||| | | || ||||||| Sbjct 885775 AAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACA-GTTTCTGAGCCTT 885717 Query 63089 TATTATAGATTTGTATCTCCTTTCTCTTT--CGTATAGTGTATACAATCGTTCGAACTCG 63146 || | ||| || | | ||||| |||| | ||| || ||||||| Sbjct 885716 GATGGTC--TTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCA 885659 Query 63147 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63206 || || |||| | ||||||| || || ||| | | ||| | ||| |||||| Sbjct 885658 TCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCG 885599 Query 63207 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63266 | |||| || | ||||||||| ||||| |||||||| | || || ||||| | | Sbjct 885598 TTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGG 885539 Query 63267 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63326 | | ||| || || || |||||| | ||| | || | | |||||| || Sbjct 885538 GCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAG 885479 Query 63327 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63386 ||||| || ||||| || ||||| | | | ||||| | |||||| || || ||||| | Sbjct 885478 TGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACA 885419 Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446 || | ||| ||||| ||| |||| | | ||| ||||| | || || ||| |||| ||| Sbjct 885418 TAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTG 885359 Query 63447 GTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63506 ||||||| ||| ||| ||| | | | || || ||| | || || || || Sbjct 885358 GTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCG 885299 Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566 || | || || || | ||| || ||| || || || ||||||||||| ||| ||| Sbjct 885298 GCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCA 885239 Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGTTCCCGCATTA 63623 || ||||| | | ||||||| ||||| || ||| || | || || || || Sbjct 885238 TCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTG-CGGC--GTACCAGCGTTG 885182 Query 63624 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63683 || | ||| || || || |||||||| || | || | ||||||||| ||||| || Sbjct 885181 AAAAGGGTTGGCGAGGCATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATC 885122 Query 63684 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63743 | || |||| | || || || || || |||||||| | | ||| || || Sbjct 885121 ACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGA 885062 Query 63744 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63803 | ||| ||| || || ||| |||| | ||| || |||| || || || || Sbjct 885061 CGTTCGGCGACCTGACCATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCG 885002 Query 63804 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 63863 |||||||||||| |||||||| ||||| | || ||||||| || | |||||| | Sbjct 885001 AAATAGTTGTATTGAAAGTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTTGTGC 884942 Query 63864 TTGTTAACTATATCCATGGTGATACTT-----GAAATAATCGGAGAATGTTTCCCATTTT 63918 | | || || || || | || | ||||| || || || || | || |||| Sbjct 884941 TCTTGCACGATCTC----GT-ACACCTCCTGGGAAATCATAGGCGAGTGAATTCCGTTTT 884887 Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978 |||| || || |||| | ||||| | || | ||| |||| | || | || Sbjct 884886 TAGGGTTCACGTAGTGATACAAATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCTGCT 884827 Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038 |||| | || || | || ||||| || || | | ||||||||||||| || || | Sbjct 884826 TGTGCAAGTTGGAAATCGCGATTCTCGCAGCCAAAGTGGCATAATCCGGGTGGATCGTTG 884767 Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097 | || || || | |||||||||| | | |||| |||||| || || || || | | Sbjct 884766 T-CATGTACGCGCACGTCTCGGCTGCCAAATTATCCAGTTCTACGGTCGTAACACCCTCA 884708 Query 64098 TA 64099 || Sbjct 884707 TA 884706 >seq8 Length=1778692 Score = 170 bits (188), Expect = 2e-37 Identities = 398/591 (67%), Gaps = 12/591 (2%) Strand=Plus/Minus Query 33294 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 33353 ||||| ||| || ||||| || ||||| ||| |||||||| | ||| || ||||| || Sbjct 705681 AAACAACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGA 705622 Query 33354 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33413 ||||||||||||||||| || || |||||| | ||| || |||| || || || || Sbjct 705621 GAACGTGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACC 705562 Query 33414 AGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGC 33470 || || || | ||||| || || || || || | || | || | | ||| | | Sbjct 705561 TGAGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTC 705502 Query 33471 GCTGTCATGTATCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33528 | ||| || ||||| | ||| ||||| |||||||||| ||||| || || | Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 33529 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33588 || || ||||| || | | | | || || ||| || || | || |||||||| | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 33589 AGACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 | || | ||| |||| || || ||||| || || ||||| || |||||||||||| | Sbjct 705383 A-ACGAGTACGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTT 705325 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||||| | ||| || ||||||| | || |||| | | |||||| ||||| || || Sbjct 705324 GGCCTCTGGAATTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACC 705265 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33764 ||| || || |||||||| | ||| || | || | ||| ||| || | Sbjct 705264 GTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCAT 705205 Query 33765 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 33824 | || ||||| || | | || || || | ||| | || || | ||||| || || Sbjct 705204 ACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGA 705145 Query 33825 TGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAA 33875 ||||||||| || ||| | |||||| || | ||||| ||| ||||| Sbjct 705144 CGCCTCTGCCCGCTTGTACGCCTGCCAGATCTCGTGATATTTGATCGGGAA 705094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947137705280