Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 125 7e-24 seq8 95.1 1e-14 >seq6 Length=1501435 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 ||||||| | ||||| ||||| | || ||||| |||| || |||| | ||||| Sbjct 435266 AAATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCT 435207 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||||||||||| | || || |||||| |||||||| || || ||||| || | Sbjct 435206 CTGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACC 435147 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 |||||||| | |||| || |||||||| | ||||||| ||||| | | || || | Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||||| ||| | || | ||| || | || ||||| || Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || ||||| |||| || |||| | ||||| | Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| |||||||| || || ||||| || ||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| || |||||||| | ||||||| ||||| | | || || ||| Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| ||| | || | ||| || | | |||||||| Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || ||||| |||| || |||| | ||||| | Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| |||||||| || || ||||| || ||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| || |||||||| | ||||||| ||||| | | || || ||| Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| ||| | || | ||| || | | ||||| || Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810 >seq8 Length=1778692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | || || || | |||||| | || | ||||| Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | || || || ||| | ||||||| |||| | |||||| ||| Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| || | || ||||| ||||| | ||||| || Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGG 1641520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662352133760