Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 178 3e-39 >seq5 Length=1414338 Score = 178 bits (196), Expect = 3e-39 Identities = 605/925 (65%), Gaps = 26/925 (3%) Strand=Plus/Plus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||| | |||||| ||||| || ||||||| | ||||||||| | | | || Sbjct 884999 TTTCGGGTTCAAGACGCTGGAGCGCTCGTACCTATTGAGAATCAATGGTCAGGTCGCCGA 885058 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 ||| || || || | | ||||||||||| | || || || | | || |||| Sbjct 885059 ACGTCCACAACACCTTGTCATGCGTGTTGCCGTCGGCATACACGGAACCAATATTGAAAA 885118 Query 363510 CGCGATTGAAACATATAAGCTTCTAA-GTGC-TCGTGTATTC-ACGCACGCCACGCCAAC 363566 | ||| || || || || ||||| || | || |||| ||||| ||| ||||||| Sbjct 885119 GGTGATCGAGACTTACAA---TCTAATGTCCCTCAGATATTTTACGCATGCCTCGCCAAC 885175 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | ||| ||||| || | | || |||||||| || || ||| | | ||||| Sbjct 885176 CCTTTTCAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAA 885235 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| || |||||||||||||||| || || | || | ||||| | |||||||||| Sbjct 885236 GGATGACTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGAC 885295 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745 ||| ||||| || || | || ||||| | | | || | | | |||| || Sbjct 885296 TGCCGGCGGTATCGGATTGCACATTCACAACATCAGGTCGACGGGATCCT-ACATCGCCG 885354 Query 363746 GCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 | || || ||| || ||||| || |||| ||| ||||||| ||| |||| ||||| Sbjct 885355 GTACCAACGG-TACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCT 885413 Query 363805 AGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | || ||||| || ||||| | |||| | || || ||||| || ||| | |||| Sbjct 885414 CGCTATGTCGATCAAGGTGGTAACAAAAGACCT--GGTGCTTTTGCCATTTATTTGGAGC 885471 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAA 363921 | || ||||||||||||| ||| | || ||||||| || ||| || ||||| ||| Sbjct 885472 CATGGCACTCCGATATTTTTGACTTTATAGATATCCGGAAGAATCAC-GGTAAAGAAGAA 885530 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | ||||| || ||||| ||| |||| | ||| || | || | ||||||||| | || Sbjct 885531 ATCCGTGCCCGGGATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTC 885590 Query 363982 GAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 |||| || || | ||| | | |||| ||| ||| ||||| | | || || Sbjct 885591 GAGG-AGAACGGAGACTGGACTTTGTTTTCTCCAAGCGAGGCGCCAGGATTGGCGGACGT 885649 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || || || | || ||| |||| || || | ||||| | | | || Sbjct 885650 TTATGGCGATGAGTTCGTGGCTTTATATGAGCGTTACGTTCAAGAGGGTCGCGGTAGAAA 885709 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| || || ||||| || |||| || ||| | || | |||| ||| || || || Sbjct 885710 GACCATCAAGGCTCAGAAACTGTGGTACGCTATCTTAGAAGCACAGACTGAAACTGGTAC 885769 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 || | ||| | || ||||| | |||||| | || || ||||| || | | ||| Sbjct 885770 TCCTTTCATGCTTTATAAAGACGCATGCAACAGAAAATCTAACCAAAAGAATTTAGGT-- 885827 Query 364221 AATTCAGCAGA----GCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 ||| || | |||| | || |||||| |||| ||| | | || | || | Sbjct 885828 --GTCATCAAATCTTCCAACTTGTGCTGTGAGATTGTTGAGTACTCTGAACCTGGTGAAA 885885 Query 364277 CTGCCGTATGTAACCTTGCGTCGAT 364301 |||| || ||||| ||||| || || Sbjct 885886 CTGCAGTCTGTAATCTTGCATCTAT 885910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256