Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 125 6e-24 seq8 100 2e-16 >seq6 Length=1501435 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||||| | ||||| ||||| | || ||||| ||||||| |||| || || || Sbjct 435266 AAATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCT 435207 Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 ||||||||||| | || || |||||| |||||||| || || ||||| || | Sbjct 435206 CTGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACC 435147 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168 |||| ||| |||||| || ||||| || | ||||||| |||| | | ||||| | Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||||| || | || ||||| || | ||||||| || Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || ||||| ||||||| |||| || || | | Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| |||||||| || || ||||| || ||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || ||||| || | ||||||| |||| | | ||||| ||| Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||| || | || ||||| || | ||||||||||| Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || ||||| ||||||| |||| || || | | Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| |||||||| || || ||||| || ||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || ||||| || | ||||||| |||| | | ||||| ||| Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||| || | || ||||| || | |||||||| || Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810 >seq8 Length=1778692 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | |||||||| | ||||||||| Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||| ||||| ||||| || ||||| || ||||| ||| || Sbjct 71266 GACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 71325 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||||| ||||| | || || ||||| ||||| Sbjct 71326 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 71385 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || |||| || || || ||||||||||| || Sbjct 71386 GAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 71423 Score = 89.7 bits (98), Expect = 4e-13 Identities = 348/534 (65%), Gaps = 36/534 (7%) Strand=Plus/Minus Query 104886 gCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAA 104945 ||| || |||||||||||||| ||||| ||||| ||||||| ||||| | | || | Sbjct 705672 GCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAG 705613 Query 104946 GCCAGGTAGA-GCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGG 105004 || || | | | ||||| |||| | | || | ||||| ||||| ||| | Sbjct 705612 TCCGGGCATAAGACCCTTCTTTT-------TCAACCAGAAAATGGCCGCAAACGAACCTG 705560 Query 105005 AGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTT 105064 ||||||| ||||||||||| ||| ||||| || | ||||| ||||| | | || Sbjct 705559 AGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAA--CAACGCTTC 705502 Query 105065 GACTT--TCAATCCATTTCTGA--GCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGC 105120 | | | | |||||| ||||| |||||| |||||| ||| | |||| | Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444 Query 105121 TCGATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA---TTCGACCA-C 105176 || || ||||| || | ||| |||| ||| || || ||||| |||| | | Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384 Query 105177 AAGAATGTTGTACATTTCCGTGTGAACGCACTCGATAGATG-TCTGTTGCGCATAGAAAA 105235 || | |||| |||| | ||| | | ||| || ||| |||| | | |||||| Sbjct 705383 AACGA----GTACGTTTCGGAGTGGATGTTCTCCAT-CATGATCTGGAACCCGTAGAAAC 705329 Query 105236 AAGACGCCTC---CATTTCGGGCACGGCCGACTGCATGTGCTCGATGATATTAGTGTTCA 105292 | ||||| |||| |||| | | | || || | || ||| ||||| Sbjct 705328 ATTTGGCCTCTGGAATTT---GCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCA 705272 Query 105293 CGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAA--AAGAATCGTTCTTT 105350 | || |||| | ||| || |||||||| || || | | ||| ||||| || || || Sbjct 705271 CAATACCGTCCGAAGCAGCGAAAAACGCAAGCAC--ACGTGAAAGGAAGAACCGCTCGTT 705214 Query 105351 ATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTC 105404 ||||||| ||||||||| |||| ||||| ||||||| ||||| || || Sbjct 705213 CTCGTTCATACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTC 705160 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||||| |||| | ||| || ||| Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | || || || || ||||||||||| || Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGG 1641520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935958081240