Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 6e-24
seq8 100 2e-16
>seq6
Length=1501435
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048
||||||| | ||||| ||||| | || ||||| ||||||| |||| || || ||
Sbjct 435266 AAATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCT 435207
Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108
||||||||||| | || || |||||| |||||||| || || ||||| || |
Sbjct 435206 CTGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACC 435147
Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168
|||| ||| |||||| || ||||| || | ||||||| |||| | | ||||| |
Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||||| || | || ||||| || | ||||||| ||
Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || ||||| ||||||| |||| || || | |
Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || |||||| |||||||| || || ||||| || |||
Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| || ||||| || | ||||||| |||| | | ||||| |||
Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||| || | || ||||| || | |||||||||||
Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || ||||| ||||||| |||| || || | |
Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || |||||| |||||||| || || ||||| || |||
Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| || ||||| || | ||||||| |||| | | ||||| |||
Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||||||||| || | || ||||| || | |||||||| ||
Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810
>seq8
Length=1778692
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || || ||||| || | || || | |||||||| | |||||||||
Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | ||||| ||||| ||||| ||||| || ||||| || ||||| ||| ||
Sbjct 71266 GACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 71325
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||||| ||||| | || || ||||| |||||
Sbjct 71326 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 71385
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || || |||| || || || ||||||||||| ||
Sbjct 71386 GAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 71423
Score = 89.7 bits (98), Expect = 4e-13
Identities = 348/534 (65%), Gaps = 36/534 (7%)
Strand=Plus/Minus
Query 104886 gCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAA 104945
||| || |||||||||||||| ||||| ||||| ||||||| ||||| | | || |
Sbjct 705672 GCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAG 705613
Query 104946 GCCAGGTAGA-GCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGG 105004
|| || | | | ||||| |||| | | || | ||||| ||||| ||| |
Sbjct 705612 TCCGGGCATAAGACCCTTCTTTT-------TCAACCAGAAAATGGCCGCAAACGAACCTG 705560
Query 105005 AGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTT 105064
||||||| ||||||||||| ||| ||||| || | ||||| ||||| | | ||
Sbjct 705559 AGAAAAACACACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAA--CAACGCTTC 705502
Query 105065 GACTT--TCAATCCATTTCTGA--GCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGC 105120
| | | | |||||| ||||| |||||| |||||| ||| | |||| |
Sbjct 705501 GTCGTCCTGAATCCA--TCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTC 705444
Query 105121 TCGATGGCATTCAAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA---TTCGACCA-C 105176
|| || ||||| || | ||| |||| ||| || || ||||| |||| | |
Sbjct 705443 TCAATCGCATTGAACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGC 705384
Query 105177 AAGAATGTTGTACATTTCCGTGTGAACGCACTCGATAGATG-TCTGTTGCGCATAGAAAA 105235
|| | |||| |||| | ||| | | ||| || ||| |||| | | ||||||
Sbjct 705383 AACGA----GTACGTTTCGGAGTGGATGTTCTCCAT-CATGATCTGGAACCCGTAGAAAC 705329
Query 105236 AAGACGCCTC---CATTTCGGGCACGGCCGACTGCATGTGCTCGATGATATTAGTGTTCA 105292
| ||||| |||| |||| | | | || || | || ||| |||||
Sbjct 705328 ATTTGGCCTCTGGAATTT---GCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCA 705272
Query 105293 CGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCTTCAAA--AAGAATCGTTCTTT 105350
| || |||| | ||| || |||||||| || || | | ||| ||||| || || ||
Sbjct 705271 CAATACCGTCCGAAGCAGCGAAAAACGCAAGCAC--ACGTGAAAGGAAGAACCGCTCGTT 705214
Query 105351 ATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACATGTCGATTTCTTC 105404
||||||| ||||||||| |||| ||||| ||||||| ||||| || ||
Sbjct 705213 CTCGTTCATACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGATCTCCTC 705160
Score = 89.7 bits (98), Expect = 4e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| ||||| || || || || ||
Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | || || |||||| | ||||||| |||| | ||| || |||
Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||| || | || || || || ||||||||||| ||
Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGG 1641520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935958081240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |