Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 9e-16 seq8 86.0 6e-12 >seq6 Length=1501435 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | |||||||| ||||| || | || || || ||||||||||||||||| | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || | ||| ||||| ||| | || || | || ||||| |||||| Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||| | | || | ||| |||| || || | Sbjct 434930 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACC 434989 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || |||||||||||||| Sbjct 434990 TCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||||| ||||| || | || || || ||||||||||||||||| | Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || | ||| ||||| ||| | || || | || ||||| |||||| Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||| | | || | ||| |||| || || | Sbjct 434161 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACC 434220 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || |||||||||||||| Sbjct 434221 TCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||||| ||||| || | || || || ||||||||||||||||| | Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || | ||| ||||| ||| | || || | || ||||| |||||| Sbjct 435098 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 435157 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||| | | || | || || | ||| || | Sbjct 435158 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACC 435217 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || ||||| || ||||||||||| Sbjct 435218 TCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 >seq8 Length=1778692 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | ||| || ||||||||||||||||| ||| | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || | ||||| || ||| |||| || | |||||||| || ||| Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | || || | Sbjct 1641400 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACC 1641341 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || ||||| || || || || || ||||||||||| Sbjct 1641340 TCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012752798720