Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq8 86.0 5e-12
seq6 86.0 5e-12
>seq8
Length=1778692
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || |||||||||||||| ||||||||||| | || ||| || |
Sbjct 71411 CTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 71352
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| |||||||| || || ||| | || | | |||||||| ||| | || || |||
Sbjct 71351 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 71292
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || | | ||| || | | | | |||||| | || ||||| ||||||
Sbjct 71291 TCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 71232
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAA 16927
|| || || |||| || |||||||||
Sbjct 71231 GTCTTACCAGTCAAGGTCTTGACAAAA 71205
>seq6
Length=1501435
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|||| || || || ||||| |||||||| || | || |||| | | || ||||| |||
Sbjct 435062 TGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGT 435121
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || |||| | | |||||||| ||| | ||||||||||| ||| |
Sbjct 435122 TTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTG 435181
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | ||||| || || || | || || || ||||| ||
Sbjct 435182 GACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTTTCCCGTA 435241
Query 16913 AGCGTTTTGACAAAAATCTGCATTT 16937
|| ||||||||||||||||||||||
Sbjct 435242 AGGGTTTTGACAAAAATCTGCATTT 435266
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 16705 TTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764
||| ||||||| | | || || | ||||| || || || ||||| |||||||| ||
Sbjct 434037 TTAACCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATC 434096
Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824
| || |||| | | || ||||| |||||||| || |||| | | ||||||||
Sbjct 434097 CGACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGG 434156
Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884
||| | ||||||||||| ||| | |||||| | | | ||||||| | ||
Sbjct 434157 AGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTC 434216
Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | || || || ||||| || || || ||||| |||||||||||
Sbjct 434217 AACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087960503920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |