Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 seq6 86.0 5e-12 >seq8 Length=1778692 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || || |||||||||||||| ||||||||||| | || ||| || | Sbjct 71411 CTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 71352 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| | || | | |||||||| ||| | || || ||| Sbjct 71351 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 71292 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | | |||||| | || ||||| |||||| Sbjct 71291 TCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 71232 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAA 16927 || || || |||| || ||||||||| Sbjct 71231 GTCTTACCAGTCAAGGTCTTGACAAAA 71205 >seq6 Length=1501435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||| || || || ||||| |||||||| || | || |||| | | || ||||| ||| Sbjct 435062 TGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGT 435121 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| | | |||||||| ||| | ||||||||||| ||| | Sbjct 435122 TTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTG 435181 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||| || || || | || || || ||||| || Sbjct 435182 GACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTTTCCCGTA 435241 Query 16913 AGCGTTTTGACAAAAATCTGCATTT 16937 || |||||||||||||||||||||| Sbjct 435242 AGGGTTTTGACAAAAATCTGCATTT 435266 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 16705 TTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764 ||| ||||||| | | || || | ||||| || || || ||||| |||||||| || Sbjct 434037 TTAACCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATC 434096 Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||| | | || ||||| |||||||| || |||| | | |||||||| Sbjct 434097 CGACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGG 434156 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 ||| | ||||||||||| ||| | |||||| | | | ||||||| | || Sbjct 434157 AGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTC 434216 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || || ||||| || || || ||||| ||||||||||| Sbjct 434217 AACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087960503920